Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1269 |
Symbol | |
ID | 3761658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1384405 |
End bp | 1386315 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637786001 |
Product | helicase c2 |
Protein accession | YP_391538 |
Protein GI | 78485613 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTAA AAATACAAAT TCAGTCGATC CTCGGAAAAG ACGGGCAACT TTCTCAAAAC ACTTCAGATT ATGAAGTGCG CCATGCTCAA GTGGAGATGG CCGAAACCGT TGCTGAGGTG ATTGATGAAG ATCAAACTCT TTTGGCAGAA GCCGGTACTG GGACCGGGAA AACCTTTGCT TATCTTATCC CCGCATTGTT ATCGGGTAAA AAAGTCATCG TATCGACCGC CACAAAGACA TTACAAGATC AATTATTACG TAAAGACATT CCTCTTTTGA TGGATATTTG TAATGCGAAA GGCACGGCCA AAATCCTGAA AGGGCGTGAA AATTATATTT GTCCCCAACG GTTAGAAATT GCTGAAACTG CGGAACAAAA TACCAAGGAA GTGTGGCGAA AGTTATCGCT GATTCATGAT TGGCAAGAAA AAACACTGAT CGGGGATAAA TCCGAGCTCA CCACGTTGGA TGAGAATGAT CCTATATGGA GCCGGGTTTG CGCGCGTATG GAATTTTGCC AGGCAAATGA ATGCACTGGC GATAATGGTT GTTTTTACCC CGGTGTAAAG CAACAAGCCA CAGATGCAGA AATATTAATC GTGAATCATC ATTTGTTTTG CGCTGACTTA GCATTAAGAG AGCAGGGATT TGGTGAAATC CTACCGGAAG CCGATATCTA TATTTTTGAT GAAGCGCACC AACTTCCTGA TATAGCGGCT CAGTTTTTAG GGTTTAGTGT CAGTCGGTTT CAATTAGACG AATTGGTAAG AGATGTTCGT TTAGCTTATA AAAAAGAATC TCCGGAAACC ATAGAACTAT CGGATCAGGC AAAAGCGGTG GAAGATAAAA TCCGCATTTT TAATGAAGCA TTAGGGAAGT GGGAAAAACG TTGGACTTGG GAAAGCTTTT CAGAAGCCAA AACCGGTCAT AAAACGCTTG AACACTTGCG GAATCAACTG TCATTGTTGG CGGAGGTGAT TAAGCCGATT ACAGATCGAG GCAAATTATT ATCGGCTTTG TATAAAAGAA CACAGGAATT TGAAAAACAG ATTGAGACTT GGTTAAAGGC CTCCTCAGAA AATCAAATAC GATGGGTAGA ATCCTCGCAA GCACGATTTA AATTAAACCT GACGCCGCTA AGTGTGGCCG CACCATTTAG TCGACAGCGT GACGCATTAG GCGGTGCCTG GATTTTTACT TCAGCCACAC TCAGCGTGAA TCAAAGCTTT GATTATTTTG CCCATCGATT AGGGCTTGAA TCAGCGCGCA CTCATCAATG GGAAAGCCCT TTTGATTATG AACAGCAAGC TGTTATTTAT CATCCGATCG GCTTACCGGA CCCGAAACAT CCTGACTACA TTAAGATCTG CTTAAGGGCG GCTTGGCCAT TGTTGCTTGC CAGCCAAGGA AGAGCGTTTT TATTGTTTAC CAGTCATAAG GCCTTGCAAG AAGCTAAGGT TATTCTATCC CAGCACTGGG AAGGAACGCT GATGGTTCAA GGCGACGGTC CTAAAACGAC GTTGCTTGCA CGTTTCAAGG AAACCGAGAA TGCTATTTTA TTGGGTACCA GCAGTTTCTG GGAAGGTGTG GATGTGAAAG GCGATGCCTT AAAGCTGGTT TTAATTGATC GAATTCCTTT TATTCCTCCC GACGACCCGG TTGTTCAAGC GAGAGAGTCC TTTTTGAAGC AAAAAGGGCT GAGCGGTTTC TTTAATTTTC AAATTCCAGA AGCAACTATT GCGCTTAAAC AAGGTGCCGG TAGGTTGATA AGAGATTCAT CCGATAAAGG GGTGTTGATG TTATGTGATC CACGGTTGAC CCAAAAGCCG TATGGTAAAA TTATTACCAA TAGCTTTCCG AGTTTTAAGT GGGTCTATGA TGTGAACGAA GCAAAAGAGA AATTACTATG A
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Protein sequence | MSLKIQIQSI LGKDGQLSQN TSDYEVRHAQ VEMAETVAEV IDEDQTLLAE AGTGTGKTFA YLIPALLSGK KVIVSTATKT LQDQLLRKDI PLLMDICNAK GTAKILKGRE NYICPQRLEI AETAEQNTKE VWRKLSLIHD WQEKTLIGDK SELTTLDEND PIWSRVCARM EFCQANECTG DNGCFYPGVK QQATDAEILI VNHHLFCADL ALREQGFGEI LPEADIYIFD EAHQLPDIAA QFLGFSVSRF QLDELVRDVR LAYKKESPET IELSDQAKAV EDKIRIFNEA LGKWEKRWTW ESFSEAKTGH KTLEHLRNQL SLLAEVIKPI TDRGKLLSAL YKRTQEFEKQ IETWLKASSE NQIRWVESSQ ARFKLNLTPL SVAAPFSRQR DALGGAWIFT SATLSVNQSF DYFAHRLGLE SARTHQWESP FDYEQQAVIY HPIGLPDPKH PDYIKICLRA AWPLLLASQG RAFLLFTSHK ALQEAKVILS QHWEGTLMVQ GDGPKTTLLA RFKETENAIL LGTSSFWEGV DVKGDALKLV LIDRIPFIPP DDPVVQARES FLKQKGLSGF FNFQIPEATI ALKQGAGRLI RDSSDKGVLM LCDPRLTQKP YGKIITNSFP SFKWVYDVNE AKEKLL
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