Gene Tcr_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1269 
Symbol 
ID3761658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1384405 
End bp1386315 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content43% 
IMG OID637786001 
Producthelicase c2 
Protein accessionYP_391538 
Protein GI78485613 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAA AAATACAAAT TCAGTCGATC CTCGGAAAAG ACGGGCAACT TTCTCAAAAC 
ACTTCAGATT ATGAAGTGCG CCATGCTCAA GTGGAGATGG CCGAAACCGT TGCTGAGGTG
ATTGATGAAG ATCAAACTCT TTTGGCAGAA GCCGGTACTG GGACCGGGAA AACCTTTGCT
TATCTTATCC CCGCATTGTT ATCGGGTAAA AAAGTCATCG TATCGACCGC CACAAAGACA
TTACAAGATC AATTATTACG TAAAGACATT CCTCTTTTGA TGGATATTTG TAATGCGAAA
GGCACGGCCA AAATCCTGAA AGGGCGTGAA AATTATATTT GTCCCCAACG GTTAGAAATT
GCTGAAACTG CGGAACAAAA TACCAAGGAA GTGTGGCGAA AGTTATCGCT GATTCATGAT
TGGCAAGAAA AAACACTGAT CGGGGATAAA TCCGAGCTCA CCACGTTGGA TGAGAATGAT
CCTATATGGA GCCGGGTTTG CGCGCGTATG GAATTTTGCC AGGCAAATGA ATGCACTGGC
GATAATGGTT GTTTTTACCC CGGTGTAAAG CAACAAGCCA CAGATGCAGA AATATTAATC
GTGAATCATC ATTTGTTTTG CGCTGACTTA GCATTAAGAG AGCAGGGATT TGGTGAAATC
CTACCGGAAG CCGATATCTA TATTTTTGAT GAAGCGCACC AACTTCCTGA TATAGCGGCT
CAGTTTTTAG GGTTTAGTGT CAGTCGGTTT CAATTAGACG AATTGGTAAG AGATGTTCGT
TTAGCTTATA AAAAAGAATC TCCGGAAACC ATAGAACTAT CGGATCAGGC AAAAGCGGTG
GAAGATAAAA TCCGCATTTT TAATGAAGCA TTAGGGAAGT GGGAAAAACG TTGGACTTGG
GAAAGCTTTT CAGAAGCCAA AACCGGTCAT AAAACGCTTG AACACTTGCG GAATCAACTG
TCATTGTTGG CGGAGGTGAT TAAGCCGATT ACAGATCGAG GCAAATTATT ATCGGCTTTG
TATAAAAGAA CACAGGAATT TGAAAAACAG ATTGAGACTT GGTTAAAGGC CTCCTCAGAA
AATCAAATAC GATGGGTAGA ATCCTCGCAA GCACGATTTA AATTAAACCT GACGCCGCTA
AGTGTGGCCG CACCATTTAG TCGACAGCGT GACGCATTAG GCGGTGCCTG GATTTTTACT
TCAGCCACAC TCAGCGTGAA TCAAAGCTTT GATTATTTTG CCCATCGATT AGGGCTTGAA
TCAGCGCGCA CTCATCAATG GGAAAGCCCT TTTGATTATG AACAGCAAGC TGTTATTTAT
CATCCGATCG GCTTACCGGA CCCGAAACAT CCTGACTACA TTAAGATCTG CTTAAGGGCG
GCTTGGCCAT TGTTGCTTGC CAGCCAAGGA AGAGCGTTTT TATTGTTTAC CAGTCATAAG
GCCTTGCAAG AAGCTAAGGT TATTCTATCC CAGCACTGGG AAGGAACGCT GATGGTTCAA
GGCGACGGTC CTAAAACGAC GTTGCTTGCA CGTTTCAAGG AAACCGAGAA TGCTATTTTA
TTGGGTACCA GCAGTTTCTG GGAAGGTGTG GATGTGAAAG GCGATGCCTT AAAGCTGGTT
TTAATTGATC GAATTCCTTT TATTCCTCCC GACGACCCGG TTGTTCAAGC GAGAGAGTCC
TTTTTGAAGC AAAAAGGGCT GAGCGGTTTC TTTAATTTTC AAATTCCAGA AGCAACTATT
GCGCTTAAAC AAGGTGCCGG TAGGTTGATA AGAGATTCAT CCGATAAAGG GGTGTTGATG
TTATGTGATC CACGGTTGAC CCAAAAGCCG TATGGTAAAA TTATTACCAA TAGCTTTCCG
AGTTTTAAGT GGGTCTATGA TGTGAACGAA GCAAAAGAGA AATTACTATG A
 
Protein sequence
MSLKIQIQSI LGKDGQLSQN TSDYEVRHAQ VEMAETVAEV IDEDQTLLAE AGTGTGKTFA 
YLIPALLSGK KVIVSTATKT LQDQLLRKDI PLLMDICNAK GTAKILKGRE NYICPQRLEI
AETAEQNTKE VWRKLSLIHD WQEKTLIGDK SELTTLDEND PIWSRVCARM EFCQANECTG
DNGCFYPGVK QQATDAEILI VNHHLFCADL ALREQGFGEI LPEADIYIFD EAHQLPDIAA
QFLGFSVSRF QLDELVRDVR LAYKKESPET IELSDQAKAV EDKIRIFNEA LGKWEKRWTW
ESFSEAKTGH KTLEHLRNQL SLLAEVIKPI TDRGKLLSAL YKRTQEFEKQ IETWLKASSE
NQIRWVESSQ ARFKLNLTPL SVAAPFSRQR DALGGAWIFT SATLSVNQSF DYFAHRLGLE
SARTHQWESP FDYEQQAVIY HPIGLPDPKH PDYIKICLRA AWPLLLASQG RAFLLFTSHK
ALQEAKVILS QHWEGTLMVQ GDGPKTTLLA RFKETENAIL LGTSSFWEGV DVKGDALKLV
LIDRIPFIPP DDPVVQARES FLKQKGLSGF FNFQIPEATI ALKQGAGRLI RDSSDKGVLM
LCDPRLTQKP YGKIITNSFP SFKWVYDVNE AKEKLL