Gene Tcr_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1251 
Symbol 
ID3760543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1366820 
End bp1368136 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content46% 
IMG OID637785983 
Producthomoserine dehydrogenase 
Protein accessionYP_391520 
Protein GI78485595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000453737 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAGG TTAAGTTAGG ATTATTAGGA TTTGGAACGG TTGGTGGTGG AACTGCCAAT 
ATTTTAGGAA CCACTCGCTC GGAAATTGAA AGACGATTGG GCGGACAGGC CATCATTGAA
ATTGTTCAGG TGGCTGTACG AGACCTTGAG CGTCAGCGTG CCGTAGACAC GGATGGACTG
CAAATGACGG TTCATCCAAT GGATGTGGTG AATAATCCTG ATGTGGATAT TGTGGTTGAG
CTGATGGGGG GAACAACCTT GGCCAAAGAC TGTATCGAAA CGGCTATTCG TCATGGCAAA
CACATCGTCA CAGCGAATAA AGCCCTCATT GCAGAACATG GCAATGAACT CTTTAAGTTG
GCCAAAGAAC ACGGCGTGAT GATTGCCTAT GAAGCCGCTG TCGCGGGTGG TATTCCGATC
ATTAAGGCGC TACGAGAAGG GTTATCCGGC AATAAAATTG AATGGGTGGC TGGCATCATT
AATGGTACCG GTAATTATAT TTTGACCGAA ATGAAGCAGC CGGATGCTGA TTTTGCAGAC
GTGTTGAAAA CCGCTCAGGA GCTAGGGTAT GCAGAAGCCG ATCCTACTTT TGATGTGGAG
GGGATTGATG CGGCACATAA ATTGGCCATT CTTGCTTCGA TTGCGTTTGG CATTGAGCTA
CAGTTTGATC GTGTCTACAC AGAAGGCATT AGCCAAATTA CAGCGGAAGA CATTCAGTTT
GCTAATCAAT TAGGGTATGA AATTAAGCAT TTAGGGATCG CCAGCCGCTC TGACAATGGT
TATTCATTAA GAGTTCACCC AACGCTTGTG CCGCAATCGG TTTTATTGGC TCAGGTCAAT
GGCGTGATGA ACGCCGTAAT GGTGAATGGC GATCATGTCG GTCCAACGAT GTATTATGGA
CCTGGTGCCG GCGCAGGACC AACAGCCAGT GCCGTAGTGG CAGACATTAT TGATATCATT
CGTGCGGAAT ATCAACCTGA TGAATACCGA ATTCCGGCAT TAGGATTTGC GCTAGATCGC
CTTGAAAGCG CTCGCGTAGT TGAAATTGAT GAAATCACCA CCGCTTATTA TTTGAGATGC
TTCGCGAAAG ACAATGCTGG GGTCTTGGCT AAAGTCACTT CAATTCTGGC GGAATTTAAG
ATCAATATTG AGCTGTTGCA CCAAGAGCCA TCCAGTCAAA ATCCAGATGA TGCTACTTTG
GTAATGATTA CCAATGCCGT GAAAGAAACG GATTTAAATA AAGCGATTAA GGCATTGGAA
AGTTTGGATG CCATTGATGG TAAAATCATG CGTATTCGAG TGGATTCGTT GGATTAA
 
Protein sequence
MKQVKLGLLG FGTVGGGTAN ILGTTRSEIE RRLGGQAIIE IVQVAVRDLE RQRAVDTDGL 
QMTVHPMDVV NNPDVDIVVE LMGGTTLAKD CIETAIRHGK HIVTANKALI AEHGNELFKL
AKEHGVMIAY EAAVAGGIPI IKALREGLSG NKIEWVAGII NGTGNYILTE MKQPDADFAD
VLKTAQELGY AEADPTFDVE GIDAAHKLAI LASIAFGIEL QFDRVYTEGI SQITAEDIQF
ANQLGYEIKH LGIASRSDNG YSLRVHPTLV PQSVLLAQVN GVMNAVMVNG DHVGPTMYYG
PGAGAGPTAS AVVADIIDII RAEYQPDEYR IPALGFALDR LESARVVEID EITTAYYLRC
FAKDNAGVLA KVTSILAEFK INIELLHQEP SSQNPDDATL VMITNAVKET DLNKAIKALE
SLDAIDGKIM RIRVDSLD