Gene Tcr_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1197 
Symbol 
ID3760615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1310455 
End bp1311120 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content44% 
IMG OID637785925 
Productcytidylate kinase 
Protein accessionYP_391466 
Protein GI78485541 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCT CAGTTGTGAC CATTGATGGC CCAAGTGGTG TTGGAAAAGG AACACTTGCA 
CAATTTCTAT GCTGCAAAAC GGGGTTTCAC CTATTGGACA GCGGCGCAAT TTATCGAAGC 
TTAGCTTATG GCGCCCTTGA AGAAGGCATT GCCTTTGATA ATTTGCCAGG CCTGGTTGTT 
TTGGCAGAAA ACCTCCCTGT TAAGTTTGTT GAAAACAGCA TTCTTTACCG AGAAAAAGAC 
ATTACCTCAA AAGTCCGCAC AGAAGAAGTG GCTGCAGTCG CCTCTAAGGT TGCCGCCATT 
CCAGAAGTAA GAGCGGCACT GTTAAAACGT CAAAAAGACT TTGCTCAACC GCCGGGACTC 
ATTGCTGATG GGCGCGATAT GGGGACGGTC GTTTTCCCAA ATGCACCTGT TAAATTGTTT 
TTAACTGCCT CGGCAGAAGA AAGAGCAAAA AGACGCGTTA AACAGTTGAA AAATCAAGGA 
GTTGATGTTA ATATTCGCCA AATAACTCAA GACATTATGG AAAGAGACGA ACGAGATCGA 
ACTCGTAAAA GCTCTCCTTT GGTGCCGGCA GAAGATGCTT TAGAGATTGA TACAACACAT 
TTATCGATTG AAGAAGTCTG TCAAATGGCA TTGAATCAAC TCTATGACGC TGGGTTAATG 
AAATAG
 
Protein sequence
MTSSVVTIDG PSGVGKGTLA QFLCCKTGFH LLDSGAIYRS LAYGALEEGI AFDNLPGLVV 
LAENLPVKFV ENSILYREKD ITSKVRTEEV AAVASKVAAI PEVRAALLKR QKDFAQPPGL 
IADGRDMGTV VFPNAPVKLF LTASAEERAK RRVKQLKNQG VDVNIRQITQ DIMERDERDR 
TRKSSPLVPA EDALEIDTTH LSIEEVCQMA LNQLYDAGLM K