Gene Tcr_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1190 
Symbol 
ID3760608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1301064 
End bp1301789 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID637785918 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_391459 
Protein GI78485534 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAG CTGACTTGAA TAAGCATAAA AATGCAGACC CGTCTGAGTT GAATAACTTC 
AATCAACTTG CGAATACCTG GTGGGATGAA TCCGGCGAGT TCGGTGCGCT GCATAAAATA
AACCCCCTTC GAATAGAATT TATCAAGCAG TTCCAATCGA TTGAAAATAA AACGATTTTG
GATGTTGGTT GTGGCGGTGG TATTTTGTCT GAGTCTTTAG CAAAGGCTGG CGGAAATGTT
ACTGGAATTG ATTTGGCTGA AGATGTGTTG ACCATTGCTC GCTTACACAG TCTGGACACG
GAAACCAAAG TGAACTATCA CTTAATTTCA GCCGAAGATC ACGCACAGAC GCATGAAGAA
GAATACGACA TCGTAACCTG CATGGAAATG CTGGAGCACG TGCCTGACCC GGCTTCCATT
ATTCATGCTG CGGCCAAAGC GGTTAAACCC GGCGGATGGG TGTTTTTTTC GACTCTGAAT
CGTAACTACA AATCGTATTT GTTGGCTATT TTCGCCGCTG AGCAAGTGCT GAATCTGGTT
CCTAAAGGCA CGCATACGCA TGACAAGTTT ATTCAGCCGT CCGAATTAGA CGCCATGGCT
CGTCAAGCCG GCTTATTTCT AAAAGAAGGC GCAGGCATTG ATTTCAACCC CCTTTTAAAA
CGATATCGAT TGACGGACCG TCTTGATGTC AACTACCTGC TGGCTTATCA AAAGTCTGCT
GTTTAA
 
Protein sequence
MSQADLNKHK NADPSELNNF NQLANTWWDE SGEFGALHKI NPLRIEFIKQ FQSIENKTIL 
DVGCGGGILS ESLAKAGGNV TGIDLAEDVL TIARLHSLDT ETKVNYHLIS AEDHAQTHEE
EYDIVTCMEM LEHVPDPASI IHAAAKAVKP GGWVFFSTLN RNYKSYLLAI FAAEQVLNLV
PKGTHTHDKF IQPSELDAMA RQAGLFLKEG AGIDFNPLLK RYRLTDRLDV NYLLAYQKSA
V