| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1178 |
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| Symbol | clpX |
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| ID | 3760323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1284137 |
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| End bp | 1285387 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637785902 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_391447 |
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| Protein GI | 78485522 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AAACCTTATA TTGTTCATTT TGTGGTAAGG CCCAAGATGA AGTAAAAAAA
TTAATTGCAG GGCCTTCGGT TTATATTTGC GATGAATGTG TTGAACTCTG TAACGATATT
TTAAAAGAAG AATTTGGTGA AGAAGAATTA AGCGGTTTTG AGTTAGATCA TTTACCAACC
CCGCACGAAA TCAGCCAGAT TCTGAATGAT TATGTAATTG GGCAGTACCA AGCGAAAAAG
GTATTATCCG TTGCGGTTTA CAACCATTAT CGACGTTTAG AAAGCGGTCA TCAAAAAGAT
GAAGTCGAAT TGAACAAAAG TAACATTTTG CTGATTGGTC CAACAGGCTC AGGGAAAACA
TTACTGGCGC AGACATTAGC AAGATTATTG GACGTACCGT TCGCCATTGC CGATGCCACG
ACTTTAACGG AAGCCGGTTA TGTGGGCGAA GACGTTGAAA GTATCGTCCT TAAGCTGTTG
CAACGCTGTG ATAATGATGC TGAAAAAGCA GAACGAGGCA TTATTTACAT CGATGAGATC
GATAAAATTA CCCGTAAATC GGAAAACCCT TCGATTACAC GAGATGTTTC TGGTGAAGGG
GTTCAGCAGG CATTATTAAA ACTGATTGAA GGGACCGTTG CCAACATCCC ACCACAAGGT
GGCCGTAAAC ACCCGAATCA AGACATGATC CAAGTCGATA CGTCTAAGAT TTTGTTTATT
GTTGGTGGGG CCTTTGAAGG GCTGGATAAA ATCATCGAAC AACGTACTGA GAAAAACATC
GGTATTGGTT TTTCAGCGGA AGTGAAGTCA CAAGACAAGA AAGCGACCGT TTCTGAAAAG
TTCCAAAACA TCGAACCTGA AGATTTGGTG AAATTTGGTC TGATTCCTGA GTTCGTAGGA
CGCCTTCCAA TCTTGGCTGC ATTAGAAGAG CTGGATGAAA AAGCCCTTAT TCAAATATTA
ACTGAGCCTA AAAATGCATT GGTTAAACAA TATCAGAAAA TGTTTGAGCT GGAAGGGGTT
GAACTCCAGT TTAGAAAAGA TGCATTGTCT GAAATTGCCA ACCTGGCCAT TGAAAGAAAA
ACCGGTGCAC GAGGATTAAG ATCCATTTTG GAAAAAACTT TGCTTGATAC AATGTATGAC
TTGCCAAGCA TGAAAAATGT TGAAAAGGTA GTCATCAATA AAGCCGTTAT TAAAGGCACT
AAAAAGCCTA TGTTGATGTA TCAAGACAGC AAAGAAAAAG TCTCTAGCTA A
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| Protein sequence | MSEKTLYCSF CGKAQDEVKK LIAGPSVYIC DECVELCNDI LKEEFGEEEL SGFELDHLPT
PHEISQILND YVIGQYQAKK VLSVAVYNHY RRLESGHQKD EVELNKSNIL LIGPTGSGKT
LLAQTLARLL DVPFAIADAT TLTEAGYVGE DVESIVLKLL QRCDNDAEKA ERGIIYIDEI
DKITRKSENP SITRDVSGEG VQQALLKLIE GTVANIPPQG GRKHPNQDMI QVDTSKILFI
VGGAFEGLDK IIEQRTEKNI GIGFSAEVKS QDKKATVSEK FQNIEPEDLV KFGLIPEFVG
RLPILAALEE LDEKALIQIL TEPKNALVKQ YQKMFELEGV ELQFRKDALS EIANLAIERK
TGARGLRSIL EKTLLDTMYD LPSMKNVEKV VINKAVIKGT KKPMLMYQDS KEKVSS
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