Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1157 |
Symbol | |
ID | 3760644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1257846 |
End bp | 1260386 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785881 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_391426 |
Protein GI | 78485501 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC GTATTGTTGT CATTGGTAAT GGGATGGTGG GACACAGTTT TCTCGAAAAA CTTATCGCCA GCGAGGGGTT TGAAAACTTT GAGGTAACAG TTTTTGGAGA GGAACCTCGC AAAGCATATG ATCGTGTGTA TTTATCTTCT TACTTTTCAG GCAAAACGGC TGAAGATTTG AGCTTGGTTA AGCCGGGGCT CTATGAGGAA AATGGTATTC AGCTGTATTT GAAAGATAAA GTCATCGATA TTGATCGTAC TCAAAAAACG ATTACGTCAG AATCCGGCCA GAAAATTTCC TATGACAAGT TGATTCTAGC AACAGGTTCC TATCCCTTTG TACCGCCTAT CAAAGGGAAT GATCGTGATA ACTGTTTGGT TTATCGAACG ATTGAAGATC TGGAAGCCAT CAAAGCTGCA GCCTCTAATG GCAAAACAGG TGTGGTAGTA GGTGGTGGAT TATTGGGTTT AGAAGCCGCT AAAGCGCTGA AAGATCTTGG TTTGGATACA CATGTGGTTG AATTTGCGCC AAGGTTAATG CCCGTCCAAT TGGATGAAGG CGGCGCGGGA TTACTGAAAA GAAAAATTGA AAATATGGGC GTACATGTCC ATGTTTCAAA AGCGACGCAA GAGATTACAG ACGGCGAAAA CTGCTTTAAT AAAATGGTCT TTTCTGATGG TGAGTCCTTG GAAACCGATA TTGTTTTATT TTCAGCCGGT ATACGTCCAC GTGATGATTT AGCAAAGCAA GCAGAATTAG CGATTGGGCC ACGTGGCGGG GTTGAAATTA ATGATCAATG CCTGACATCA GATCCTAACA TTTATGCTAT TGGTGAATGC GCGCTGCACA ACGGTGTGAT CTATGGACTG GTTGCGCCCG GTTATGCCAT GGCACAAGCG GTCGTCGATC AACTCAATTT AACCTCTGCC AGCTTTGAAG GCGCGGATAT GAGCACCAAG TTGAAGTTAA TGGGGGTTGA TGTTGGTTCC ATCGGAGACC CTCATGGTAA CGATGAGAGC GCGTTGTCTT ATGTCTATGA AAATGGTCCG GAAGAGGTCT ATAAAAAAAT CGTCGTTTCG TCAGATGGCC AGACATTATT AGGCGCGGTT TTGGTCGGAG ATGCAGAGGA TTTTAGCAAT CTCTTGCAAA TCATGCTAAA TGACATGACG TTGCCAGAAC ACCCGGACTC GTTAATTCTT CCTAATCGGG ATGGCGGCGG CAGTGACTTA TTCGGCCCAG ATGCCTTACC TGAAACAGCT CAGCTTTGTT CGTGTTATGA CGTGTCCAAA GGTGACATTA TTCAAGCCGT TGAAGCAGGG TGTTGCACGG TTTCAGACGT AAAAGCATCC ACACAAGCGG GTACAGGCTG CGGGGGATGT GTTCAACTGG TGACCAATGT TTTAAACAAT GAGCTAGAAA AACGTGGGGT GGAAGTCAAT ACCGACCTTT GCGAACATTT TAGTCATACC CGTCAAGAAC TGTTTCATAT TTGTCAGGTT GAAGAAATTA AAACCTTCGA AGATCTTATA CAAAAGCATG GTCGTGGGCA CGGTTGTGAT ATTTGCAAAC AAACCACAGG CAATATTTTT GCCTCTTTAT GGAATAGCTA TGCCTTGGAA CCTGACAAAA TTCCACTGCA AGATACCAAT GATAATTATT TGGGTAACAT GCAAAAAGAT GGAACGTATT CGGTGATTCC TCGAGTGCCT GGAGGGGAGA TAACGCCTCA AAAATTAATC GTTCTGGGTC AGGTTGCGAC TAAATACAAA CTCTATACAA AGGTTAACGG GGGACAACGA ATTGTGCTGT TTGGGGCGCA GATGAATGAC CTTCCTGCGA TTTGGAAAGA ATTGATTGAT GCAGGGTTTG AGTCTGGTCA AGCTTACGCT AAAGCTCTTA GAACGGTTAA GTCATGCGTA GGGTCAACCT GGTGTCGTTA TGGTTTAGAC GATTCTGTCA CCATGGCGAT TGACATGGAA AATCGTTATA AAGGGCTTCG CTCACCCCAT AAAATCAAAA TGGGTGTGTC GGGTTGTACA CGTGAGTGTG CGGAAGCACA GGCAAAAGAC ATTGGGTTGA TTTCAACAGA AGAAGGCTGG AATTTATATG TGTGTGGTAA CGGAGGAATG AAGCCGCGCC ATGCTGACTT ATTTGCAACA AAATTGACTC AGGAAGAGGT TTTCCGTTAT GTCGATCGGT TATTGATGTT TTATATCAAA ACGGCGGATC GTCTACAAAG AACCGCCAGT TGGCTGGATA ACCTAGAAGG TGGGTTAACT TATTTACAAG AGGTCGTGAT TCAAGATTCA TTAGGCATTG GCGAGTCTCT CGAAGATCAA ATGAAACGTT TGCGTGAGAC TTATGAGTGT GATTGGAAGC GAGCTATTGC AAACCCATCC TTTACGAAAA GATTCCGTTC TTTTGTCAAT GTGGACAATA AAGCCGAGCA GTTGTTTGTT CAAGAACGAG GGCAAATTCG GCCGGCCACC GAGCAGGATA AATTGAACGG AATTGCGGTT CAAGTTAAAG AAATCGCTTA A
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Protein sequence | MKQRIVVIGN GMVGHSFLEK LIASEGFENF EVTVFGEEPR KAYDRVYLSS YFSGKTAEDL SLVKPGLYEE NGIQLYLKDK VIDIDRTQKT ITSESGQKIS YDKLILATGS YPFVPPIKGN DRDNCLVYRT IEDLEAIKAA ASNGKTGVVV GGGLLGLEAA KALKDLGLDT HVVEFAPRLM PVQLDEGGAG LLKRKIENMG VHVHVSKATQ EITDGENCFN KMVFSDGESL ETDIVLFSAG IRPRDDLAKQ AELAIGPRGG VEINDQCLTS DPNIYAIGEC ALHNGVIYGL VAPGYAMAQA VVDQLNLTSA SFEGADMSTK LKLMGVDVGS IGDPHGNDES ALSYVYENGP EEVYKKIVVS SDGQTLLGAV LVGDAEDFSN LLQIMLNDMT LPEHPDSLIL PNRDGGGSDL FGPDALPETA QLCSCYDVSK GDIIQAVEAG CCTVSDVKAS TQAGTGCGGC VQLVTNVLNN ELEKRGVEVN TDLCEHFSHT RQELFHICQV EEIKTFEDLI QKHGRGHGCD ICKQTTGNIF ASLWNSYALE PDKIPLQDTN DNYLGNMQKD GTYSVIPRVP GGEITPQKLI VLGQVATKYK LYTKVNGGQR IVLFGAQMND LPAIWKELID AGFESGQAYA KALRTVKSCV GSTWCRYGLD DSVTMAIDME NRYKGLRSPH KIKMGVSGCT RECAEAQAKD IGLISTEEGW NLYVCGNGGM KPRHADLFAT KLTQEEVFRY VDRLLMFYIK TADRLQRTAS WLDNLEGGLT YLQEVVIQDS LGIGESLEDQ MKRLRETYEC DWKRAIANPS FTKRFRSFVN VDNKAEQLFV QERGQIRPAT EQDKLNGIAV QVKEIA
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