Gene Tcr_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1156 
Symbol 
ID3760643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1256598 
End bp1257809 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content44% 
IMG OID637785880 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_391425 
Protein GI78485500 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGA AACTCATTTT AGTCGGCACA GGAATGGCAG GAACGCGTTT TCTTGAACAC 
CTTTTAGAGG AAGCGCCGAA CCGTTATGAA ATTGAGGTGT TCAATAAAGA GCCGGTTGGT
GGCTATAACC GCATTATGTT ATCTCCGGTA TTGGCGGGTG AAAAAACGAT TCCAGACATT
ATGACCCATG ATGAAGCCTG GTTTGAGGAA CGAAGAATAC GTTTACATAC CGGCAAGACG
GTTTCCGCAA TTGATTCAGT TGGGCAGGTT CTCACCACCT TTTGCGGCGA GACGTATTTT
TACGACAAAT TGGTTATCGC AACAGGTTCT AACCCTTTTA AATTAGAGAT ACCAGGCGCT
GATTTACCGG GTGTTGTCAC GTTTAGAGAT ATTCGTGATG TCGAAAACAT GCTGTCGGTT
TCTCAGAACC ACAATAAAGC CGTGGTAATT GGTGGAGGGC TACTAGGGTT GGAAGCCGCC
CATGGCTTAA TAAAAAGAGG GATGGACGTC ACTGTTATTC ATCGAAGCGA GGTGCTGATG
AATATGCAAA TGGATGAAGA GTCGGGGCAA TTACTAAAGA GCCATCTCGA ACAAGGTTCG
AGCCATGCCT TAGGCATGAA ATTTCGACTC GGTGTCAATA CAACTGAGAT TTTAGGGCAA
CATCAGGTTG AAGGTGTTCG TTTAGACGAT GGGTCAGAAA TTGCAACCGA CCTGGTGGTG
ATGTCGATAG GCATTCGTCC TAACACACAG TTAGCCAAAC AGGCTAATCT TGATGTTAAT
CGTGGCATTT TAGTAAATGA CTTCCTTGAA ACCTCCGCTG AAAATATTTA TGCCTTAGGT
GAATGCAATG AACACCGTGG CCAAACGTAT GGCTTAGTCG CTCCTTTGTA TGAGCAAGCC
AAAATATTGG CGAAAAGGTT AGCAGGGCAG TCCGTGTCTT ATACAGGCTC CATCACTTCG
ACAATGTTGA AGGTTACTGG GGTTCAGTTG TTTTCTGCTG GTGAGTTTAA AGGGGAAAAC
GGAGCAGATG TTATTGTTTT TAGAGATCTG GCAAAAAATA TTTATCGAAA AATTGTATTA
AAAAACAACC AGGTCATCGG AGCCCTTTTA TTTGGTGATA CCACTGGTGC TACTTGGTTA
TTTGAACTGT TACGACAAAA ACAAAATATT TCGCCGATGC GAGATACGTT GGTTTTTGGT
CCGGGTTATT GA
 
Protein sequence
MKPKLILVGT GMAGTRFLEH LLEEAPNRYE IEVFNKEPVG GYNRIMLSPV LAGEKTIPDI 
MTHDEAWFEE RRIRLHTGKT VSAIDSVGQV LTTFCGETYF YDKLVIATGS NPFKLEIPGA
DLPGVVTFRD IRDVENMLSV SQNHNKAVVI GGGLLGLEAA HGLIKRGMDV TVIHRSEVLM
NMQMDEESGQ LLKSHLEQGS SHALGMKFRL GVNTTEILGQ HQVEGVRLDD GSEIATDLVV
MSIGIRPNTQ LAKQANLDVN RGILVNDFLE TSAENIYALG ECNEHRGQTY GLVAPLYEQA
KILAKRLAGQ SVSYTGSITS TMLKVTGVQL FSAGEFKGEN GADVIVFRDL AKNIYRKIVL
KNNQVIGALL FGDTTGATWL FELLRQKQNI SPMRDTLVFG PGY