Gene Tcr_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1146 
Symbol 
ID3762134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1242679 
End bp1243266 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content46% 
IMG OID637785867 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_391415 
Protein GI78485490 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.88474e-12 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAC AATCTTTACC TATGATCATG ACCTGGTCTC GAGTCGCCTT AATCCCGGTT 
TTTTTAGTCT GTTATTACGC CCCCATAGAG GATGCCCGCT TTTGGGCTGG CTTGGCCTTT
ATGATTGCGG CCATTACCGA CTGGTTTGAT GGGTATTTAG CCAGAAAACT GAATGTCAGT
AGTAAGCTGG GGGCTTTCTT GGACCCAGTG GCGGATAAAT TGATTGTTGC GGCTGCTTTG
ATTGTGGTGT CGGTTGAATA TCAGAATATT TGGGTGACGT TGTCTGCCAT TGTGATTATG
ATGCGAGAAA TCAGTATTTC AGCCTTAAGA GAATGGATGG CGGAAAACAA TGCTCGTGAT
GTCGTGGCCG TTTCCAGCTT AGGAAAAATC AAAACTGCTT CACAACTGGC CGCATTGACA
TGGTTGTTGT ATGGCGGCGA GCTTTGGGGC GTTGACTGGG GAACTTTAGG CTTCCCTATG
CTGTATTTTT CAGCGGTGCT AACGGTTATT ACATGGTATC AATATGGGCG CGCTGCCTTG
CCTGTGATGC TTGAAACGGT ATCGGATGAA ACAAAAAAGC CATCATAA
 
Protein sequence
MTLQSLPMIM TWSRVALIPV FLVCYYAPIE DARFWAGLAF MIAAITDWFD GYLARKLNVS 
SKLGAFLDPV ADKLIVAAAL IVVSVEYQNI WVTLSAIVIM MREISISALR EWMAENNARD
VVAVSSLGKI KTASQLAALT WLLYGGELWG VDWGTLGFPM LYFSAVLTVI TWYQYGRAAL
PVMLETVSDE TKKPS