| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1145 |
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| Symbol | |
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| ID | 3762133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1240748 |
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| End bp | 1242589 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785866 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_391414 |
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| Protein GI | 78485489 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000360051 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATC AATTCGAAAC CCAATTTGAT ATTGATGCTT TTCTCAAGCA TTTAACCGAG
CGGCCTGGTG TCTATTTGAT GTACGACGCC AGTGGCCAGA TTATTTATGT GGGGAAAGCT
AAGAATTTAA AGCGACGGGT ATCCAGTTAC TTTAAGAAAC GACATGAAGA GATTAAGACG
GAAACGTTGG TGTCACAGGT GGCTTCCATT GAGGTGACGG TGACCGACAC AGAGTCTGAA
GCTTTGATTC TTGAAAATAC ATTAATTAAG CGTCATAAAC CTCGCTATAA CATCTTGTTC
CGCGATGATA AGTCTTATCC TTACATCTTT GTATCAACCG GTAAAAAATT TCCTTCGTTA
AGTTACCATC GTGGCGCAAA GCGTAAAGTG GGACGTTATT TCGGCCCTTT TCCGAATGCG
TCTGCCGTGC ATCAGACATT ACATGCCTTG CAAAAAATCT TTCCTGTCAG GCAGTGCACA
GAGAGTGTCT TTAATCATCG ATCACGTCCG TGTCTGCAAT ATCAGATTAA GCGTTGCTCC
GGTCCTTGTG TAGAAGGGTT GGTCACAGAG GCCGAGTACA ATGAAGACGT GCAGCATACC
ATTGCGTTTT TAGAAGGGAA AAGTTTTGAT GTGATTGAGT CGCTCGGACA TAAGATGCAA
CAGGCCTCCG ATGAGTTTGA GTTTGAGAAA GCGGCGCTTT ACAGAGATAA GATTTCTGCT
TTAAGGGCGA TACAAAGCCA GCATTTAATC AATCAACCCG GTTCAAAAGA TACCGATGTA
GTTGCTTTGG CAGAAGAAGC GAACCAAGTA TGCGTGTCAA TTATGATGTA TCGTGGTGGC
AATTTATGGG GCAGTCAAAA TTATTTTCCT AAAATCGGTG GGCAATCCAT CAATCCGGGT
GAAATAATCA GTGCCTTTAT TACGCAACAT TATATTGATT TGCCGATTCC GCAGATGATT
TTAGTGTCGG ACGTACTGGA AGATAAGTCG TCATTGGAAA CATGGTTGTC TGAGCAGAAA
AAAGCCAAAG TTTCGATTCG AAAAGCAGTC AGTCAGACGC ATAAAGGTTT GATGAAACTG
GCGTTGACAA ACGCACAGTC TGGGTTAAAG CAGCAATTGA CGCAAAAGGC CTCTCAAGCA
GAGCGTGTCA AGTCGCTACA AGACGTCTTG GCTTTGGCTT CGCCCCCTAA TCATATGGAG
TGTTTTGACA TCAGTCATAC GCAAGGAAAT CAGACAGTGG CCAGTTGTGT CGTATTTAAC
GAAGGGGTGC CCAACACCAG TGCCTATCGG AAATTCAATA TAGAAGGTAT TCAGCCCGGT
GATGATTATG CGGCCATGCA TCAAGCCATC ACTCGGCGCT ACAGTCGAGT AAAGAAAGAA
GGACTGCCAT TACCCGATCT TATCGTGATT GACGGTGGGA AAGGGCAGTT AAACAAAGCC
ATTGATGTTT TTAAGACATT GGAGTTAGAT AATCTTCCAT TGGTTTCTGT TGCTAAAGGG
GAAGGGCGAA AGGCAGGCCT GGAGATTTTA TACACCCCGT TTAATGAAGA AGGGATTGAT
TTAGAAGCAG ACGATATTGC ATTGCACTTA CTGAACTATA TTCGAGATGA AGCACATCGG
TTTGCCATTA CCAGTCATCG TAGCCGTCGG CAGAAAGCGC AAACACATTC ACGTTTGGAA
GACATTCCTG GCGTTGGTGC TAAGACACGT CATAAATTAT TGACGCACTT CGGTGGGTTG
ACAGAAGTCA AGAATGCGGC GGTTTCAGAG TTGCAAAAAG TGCCTGGAAT CAGTGCCCGA
ATTGCACAAA CCATCTATGA TTTTTTTCAC GGAGAAATCT GA
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| Protein sequence | MPNQFETQFD IDAFLKHLTE RPGVYLMYDA SGQIIYVGKA KNLKRRVSSY FKKRHEEIKT
ETLVSQVASI EVTVTDTESE ALILENTLIK RHKPRYNILF RDDKSYPYIF VSTGKKFPSL
SYHRGAKRKV GRYFGPFPNA SAVHQTLHAL QKIFPVRQCT ESVFNHRSRP CLQYQIKRCS
GPCVEGLVTE AEYNEDVQHT IAFLEGKSFD VIESLGHKMQ QASDEFEFEK AALYRDKISA
LRAIQSQHLI NQPGSKDTDV VALAEEANQV CVSIMMYRGG NLWGSQNYFP KIGGQSINPG
EIISAFITQH YIDLPIPQMI LVSDVLEDKS SLETWLSEQK KAKVSIRKAV SQTHKGLMKL
ALTNAQSGLK QQLTQKASQA ERVKSLQDVL ALASPPNHME CFDISHTQGN QTVASCVVFN
EGVPNTSAYR KFNIEGIQPG DDYAAMHQAI TRRYSRVKKE GLPLPDLIVI DGGKGQLNKA
IDVFKTLELD NLPLVSVAKG EGRKAGLEIL YTPFNEEGID LEADDIALHL LNYIRDEAHR
FAITSHRSRR QKAQTHSRLE DIPGVGAKTR HKLLTHFGGL TEVKNAAVSE LQKVPGISAR
IAQTIYDFFH GEI
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