| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1144 |
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| Symbol | |
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| ID | 3762132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1239730 |
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| End bp | 1240668 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785865 |
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| Product | peptidase S49 |
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| Protein accession | YP_391413 |
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| Protein GI | 78485488 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.148766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATC AGAATCAAAA TGAAGGTTTA AATCGTTTAG CAGGCGCAGC AGAAAATTTT
GTTAAGCAAG AAAAATGGAG TCGTCGCTGG ACGAACTTAT TAAAGCTTTC GGTGATTCTT
TATATTATCG TGACGCTGGT CATGCTTGCC AGTCAGTTTA CGTCTGAAGA AGATGTTTTG
AGTGGTAGCA AACATGTGGC GGTTGTGAAA CTTGAAGGGG CTATTATGCC CGGCAGCCGA
ACCAGTGCAG AAACATTAAA CCCATTGTTA AACAGTGCGT TTAAAAACCC AAATTCTCAG
GCCGTCATCA TTAAAGCCAA TTCACCTGGC GGAAGCCCTG TGCAATCCGC CCTCATTAAT
GATGAGATTA CTCGATTGAA AACCCTATAC AACAAACCGG TTTATGTTGT GGTTGAAGAC
CTCTGTGCAT CAGGTTGTTA TTACATTGCC GTTGCCGCCG ATAAAATTTA TGCCAATAAA
GGTTCCATCA TTGGTTCAAT TGGCGTACGC ATGGATACTT TCGGCGTCAC TGGACTGATG
GAGAAAATGG GAATTGAAAA CCGCTCGATG CATGCCGGTG AACACAAGGC TTTTATTGAT
CCTTTCAGCC CAAAGGATGA AAGCGGACGC CAATTTTTTC AAGAACGTAT TTTAGAAAGA
ACACATCAGC AGTTCATTGA GGCGGTTCGA AAAGGCCGTG GCGACCGCAT TAAAGAAAAT
GAAAACACCT ACACCGGATT GGTTTGGCTT GGTGATGAAG CGGTCAAGAA TGGCATGATT
GATGGTTTGG GTGACATCGG TTATGTGAAG CGAGAAATCA TCAAACAAAC CAATACACGT
CATTATGAAG CGGAAAAAAC ATTCATGGAA CAATTAATGG GTGACATCAG CAGCGAAACC
GCAACTCGGC TTTCAATGTA TTTCACGACG TTAAAATAA
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| Protein sequence | MDNQNQNEGL NRLAGAAENF VKQEKWSRRW TNLLKLSVIL YIIVTLVMLA SQFTSEEDVL
SGSKHVAVVK LEGAIMPGSR TSAETLNPLL NSAFKNPNSQ AVIIKANSPG GSPVQSALIN
DEITRLKTLY NKPVYVVVED LCASGCYYIA VAADKIYANK GSIIGSIGVR MDTFGVTGLM
EKMGIENRSM HAGEHKAFID PFSPKDESGR QFFQERILER THQQFIEAVR KGRGDRIKEN
ENTYTGLVWL GDEAVKNGMI DGLGDIGYVK REIIKQTNTR HYEAEKTFME QLMGDISSET
ATRLSMYFTT LK
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