Gene Tcr_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1136 
Symbol 
ID3762124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1228663 
End bp1229808 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content42% 
IMG OID637785857 
Producthypothetical protein 
Protein accessionYP_391405 
Protein GI78485480 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGC TTTGGTGGCG TCGTATTTTT GCGTTAACAC AAAAAGAGCT GTTACAGTTC 
AGTCGTGATT TGATTCTGGT TGTGGCGACC ATTTATTTTT TTACTGGAGA AGTCTATATT
GCGGGCAAAG GGGTTAGCTT AGAACTGGTT AAAGCGCCTA TTGGTTATAT GGATCACGAT
CAGTCTTTAG CCAGCCGGGA ATGGTTAAAT AAATTACGAC CGCCTTATTT TGATGTCAAA
GGTCAGATTA CGGAAGAGGC GACCGCTTTT GAGCTGCTGG ATAAAAGCCA GCTATTGGGT
GTCATTGATA TTCCGCCTCA CTTTCAAAGA GATTTACTTG ATGGACGATC CACCGCCATT
GGCTTTCAAT TGGATGGTAG CAATGTTGTT TTGGGTAATC TTGCCAACAG TTACACCGGG
CTGGCCAATG CGTATTTCAA TCAGGAATGG ATGCTGAAAC AAATGAAGGT GACACCGGCA
CAAGCGCTGG AAGTGCCGAG AGTCGATATG CGTCAGATGG TGTTGTTTAA CCCTGAGGGG
AATAATGCCT GGTTTATGTC CATTTCTGAA ATGATGACGG TAATGACCAT GCTTTCTTTA
TTCTTAACAG CGGCCATTGT GGTGAAAGAA AAAGAACGCG GCACCATTGA GCAACTTTCA
ATTGCACCGC TCACACCTTT ACAAATTTTA TTACCGAAGA TATTGGCTGT TGAATTGATT
TTATTATGTG GGATTGCCTT ATCGATTTTT GTGGTGCTTT TGCCGGTTTT TAACGTGCCT
TTCCAAGGCA GTTTTTTCCT ATTCTTTCTG GTGTCAGCCG TTTATGTTTA TGCCGTTTCT
GGGCTAGGAT TGTTTATTGC AACCATCAGT AAAAATTTGG CGCAGGTCAT GATCATTTCG
ATCTTATTAT TGATGCCGAT TATTTTATTG TCGGGCGCGT TTACGCCACC TGAAGCCATG
CCAAAATGGG AGCAAGCTTT GATTTGGTTG TCACCGTTAT ACTATTACAT CAATATGGGG
TATGGGATTA TTTTAAAAGG GTCAGGCCTG GAGATTATTT GGCAGAATTT ATTGGCGTTG
TTTGCCTTAG GGTCCGTCTT GTTTTTATTT GGCATTCGTC AGTTTAAAAA ACAGTTCGAA
GTCTAG
 
Protein sequence
MNWLWWRRIF ALTQKELLQF SRDLILVVAT IYFFTGEVYI AGKGVSLELV KAPIGYMDHD 
QSLASREWLN KLRPPYFDVK GQITEEATAF ELLDKSQLLG VIDIPPHFQR DLLDGRSTAI
GFQLDGSNVV LGNLANSYTG LANAYFNQEW MLKQMKVTPA QALEVPRVDM RQMVLFNPEG
NNAWFMSISE MMTVMTMLSL FLTAAIVVKE KERGTIEQLS IAPLTPLQIL LPKILAVELI
LLCGIALSIF VVLLPVFNVP FQGSFFLFFL VSAVYVYAVS GLGLFIATIS KNLAQVMIIS
ILLLMPIILL SGAFTPPEAM PKWEQALIWL SPLYYYINMG YGIILKGSGL EIIWQNLLAL
FALGSVLFLF GIRQFKKQFE V