Gene Tcr_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1119 
Symbol 
ID3762060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1206943 
End bp1208790 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content42% 
IMG OID637785840 
Productsignal-transduction protein 
Protein accessionYP_391388 
Protein GI78485463 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTC AGCAACAGTT AAATTTTTTA AAGCAAGTGG AACCGTTTTC AGCCTTGAGT 
TTGAAAGAGT TAACGCGGTT AGCCTCTGCG CTGGATGTAG TGTATTTTCC TTTAAAGACG
ACACTTGAAC TGTCAAGTCA TGCGTCTTCA AAGCAAAGTA CATTTTTATA TTTTGTGATT
AAAGGGCATA TTGCCGAATT TGACGAAAAC AATCGTCAAA GAGCGGTGTA TGGCGCGAAC
ACTTTTTTCG GGGATGCGTT GTTATTAAAA AGAGAATCGT ATCTTCGTTA TGAAGTGATT
GAAGAGGCAA TTGCTTATCG CTTGCCGCAA ACCGTTTTCC TTGAACTGGT CTCTCAGCCT
GAAATTCAAG GGTTCTTTAT TGATGATATC ACCGCAAAAC TGAATCGGCT TCATGCTCAA
ATTCAAGCGG AGTCCTCCAG TGAAGCCTTA ATGGGGATTG TCGAAGAAGC ACCATTACAA
TCTCTGGTGG AAGTCAACGA ATCAGCCAGC ATAGAAGAGT GTGTTCAAAA AATGCGGCAA
TACCAAACGG ATGCTTGTGT GGTGCGTTTT AGCGCCTCCA ATGACGTTGG GATTGTAACC
TCAATTGATT TACTTAATGC GCTCGCATTG GATCATTTAT CTGTAAAGGC AGAAGTCGGG
AGTTTAGCGA CCGTGCCGAT AGTCTCGGTT CATCAATTCG ATTATTTATT TAATGCGTTA
CTTAAGATGA CCAAGTTTCG AATCAATCGT TTGGTGGTTC GGTCTGATGA AGGTTTGGTT
GGGGTGTTGC ATCAGAAAGA TTTAATGGGA ATGTTTGCCA ACCAGTCCGG TTTGGTGGTG
TTGAGTATTC AGCAAGCGGA AAAAATGGAC GACTTGAAAA GCGTGATTCA TCAAATTGAT
GCACTGGTAA TCAATTTAAA CAATCGCGGC GTGAAAACGC ATTACATTGC CAAGCTTGTC
AACGAGCTGC ACCGCAAAGT TATGGAAAAA GTGTTTGAGT TCTTAAAACC TTTTCCGGAA
CTGCAATCAG GCTGTTTGCT GGTGATGGGC AGCGAAGGGC GTGCAGAGCA AGTGATTAGA
ACGGATCAGG ACAATGCCTT CATTTTGCCG GATTCCGCTA AGAATCTCCC AGGCCTGGTG
GATTTTATGC AAGAGTTCAC TCACAGTTTG ATCGCATTAG GTTTTCCGCC TTGTCCTGGT
AATATCATGG TTTCAAATCC AGCGTGGTGT CAAACCTTGT CGGAATTTAA ACAGCAACTT
AGAGAATGGA TGATGCAGCC AACCGCGGAG GCGTTCATGA ATTTATCGAT TTTCTTTGAT
GCCGATGTCG TTCTGGGGGA TGACTCATTA TTATTGGAAG CCAAGCAGGT TATGTTGAAC
TGGGTGGCCG CGAATCAACA CTTTCTACCG CATTTTGCCA AGCCTGTTTT GCAGTTTGAG
ACCCCGATTA GTTTTTTTGG CAAACTGGTC ACGGATAAAA AATCTCGCAA ATCGCAAATT
GACATTAAAA AAGGCGGTGT TTTTCCAATC GTTCATGGCG TTCGATGTTT GGCAATCGAG
AAAGGTATTT TAAAAACCAA TACTCATTGG CGCATAAAAG CGCTGATGCA ACAAGGTGTT
TTAACAGACG CATTTGGCAT AGAACTGGGA GAAACCTTAA ATTTTTTAAA CACGCTCAGG
TTGGAATCGA TGGTTGATCA AGTGCGGCGA GATCAGGTTC CGGATAACTT TTTGCAAGTG
TCTGATTTAA CGCCCATTCA ACAAGATTTA TTAAAAGAAG CCTTTAGTGT GGTGAACCGG
TTCAAAAAAT TGATCGACCA TCACTTTAAA GTTTCTGCGG TTTTATAG
 
Protein sequence
MSIQQQLNFL KQVEPFSALS LKELTRLASA LDVVYFPLKT TLELSSHASS KQSTFLYFVI 
KGHIAEFDEN NRQRAVYGAN TFFGDALLLK RESYLRYEVI EEAIAYRLPQ TVFLELVSQP
EIQGFFIDDI TAKLNRLHAQ IQAESSSEAL MGIVEEAPLQ SLVEVNESAS IEECVQKMRQ
YQTDACVVRF SASNDVGIVT SIDLLNALAL DHLSVKAEVG SLATVPIVSV HQFDYLFNAL
LKMTKFRINR LVVRSDEGLV GVLHQKDLMG MFANQSGLVV LSIQQAEKMD DLKSVIHQID
ALVINLNNRG VKTHYIAKLV NELHRKVMEK VFEFLKPFPE LQSGCLLVMG SEGRAEQVIR
TDQDNAFILP DSAKNLPGLV DFMQEFTHSL IALGFPPCPG NIMVSNPAWC QTLSEFKQQL
REWMMQPTAE AFMNLSIFFD ADVVLGDDSL LLEAKQVMLN WVAANQHFLP HFAKPVLQFE
TPISFFGKLV TDKKSRKSQI DIKKGGVFPI VHGVRCLAIE KGILKTNTHW RIKALMQQGV
LTDAFGIELG ETLNFLNTLR LESMVDQVRR DQVPDNFLQV SDLTPIQQDL LKEAFSVVNR
FKKLIDHHFK VSAVL