| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1112 |
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| Symbol | |
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| ID | 3760724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1195502 |
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| End bp | 1197748 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785833 |
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| Product | AAA ATPase |
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| Protein accession | YP_391381 |
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| Protein GI | 78485456 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000319586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGTA AAGAATTACA GCTCACTCTG AGTAACGCCT TTAGTTTGGC AAATGAGTAT
GAGCATGAAT ATGTCACCCT AGAGCACTTG CTATTAGAAT TGCTTGGGTT GCCATCGGTG
CGTGAAGCGA TTGAAGCCTG TGGTGTCAAA CTGACCACCA TTGAATCGGA GCTGGAAAAG
TATCTCGACG GTGAAGCCGC AGGCATCAAG ACAGAAGAGT TGTTGCCTAC CATGGCTTTC
CAGCGCGTGA TTGAGCGTGC GATTTATTTA GTGCAGTCGA ATGGCTATAC CGAAGTGACA
GGGTTGCACG TTCTGGCGTC TATTTTCTCT GAGCAAGATT CTCATGCCGT TTATGTGTTG
GAAAGCTGTG GTGTGCACCG TGTGGATATT TTAAGTTATA TCTCGCATGG GGTGACCGCT
CAGCAACAAG AAGACTTTTT GACGTCTTCT CCCTCTGAGG AATCGATTGA AGATGCTGAA
GCGGGTGAGT CTGAAAACAA TCCAATAACC AATTACAGTG TTAATCTCAA TGAAGAAGTT
GAGATGGGGC GCATTGATCC AATTATTGGA CGCGAATGGG AATTGACTCG AACATTAGAA
GTTTTGAGTC GACGTCGTAA AAACAATCCT TTACTGGTCG GAGAGCCGGG TGTCGGGAAA
ACCGCCGTAG CCGAAGGGTT AGCGCATCGC ATTGTTGAGA AGAAAGTGCC TGAGCAGTTA
ATGGATGCTG AAATCTTTAG CTTGGATATG GGAGCTTTGT TGGCGGGGAC GCGTTATCGA
GGTGACTTTG AAAAGCGTTT CAAGGCTTTA TTGAAGGCAT TGGAAGAGCG GCCGCATGCG
ATTCTGTTTA TTGATGAAAT TCATACCATT GTTGGTGCCG GCGCTGTTCA AGGTGGCGCC
ATGGATGCAT CTAACTTAAT GAAACCGGCG TTGTCATCGG GTAAATTACG CTGTGTTGGT
GCAACAACGT ATGAAGAATA TCGTGGTATT TTTGAAAAGG ATCGTGCTTT GGCACGCCGT
TTCCAAAAAA TTGATGTGCA TGAACCGACT ACCCAGGAAA CGTTTGAAAT CCTAAAAGGA
CTGAAGTCGC AATTCGAAAG TCATCACCAT GTGAAATATA CCTTACCGGC TTTAAAAATG
GCGGTGGATT TATCTGCACG CTACATCAAT GATCGTCATT TGCCAGATAA GGCCATCGAT
GTGATTGATG AAGCCGGGGC CAAACAGGCG CTGATGCCGA AAAGCAAACG CAAAAAACAA
ATCTCTGTTG CTGAAATTCA GCAAATTGTA GCGAATATCG CGCGTATTCC TGTGTCGCAG
ATTACCCAGA AAGAAAAAGA TAAGTTGATG AACTTGGAAG AAAGTTTGCA ACGAGTGGTC
TTTGGTCAAG ATGAAGCGGT GCACAGCGTC GTCTCCGCAA TTAAGTTGGC TCGATCAGGA
CTGAATGAGG GTGATCGTCC GACAGCTTCT TTCTTGTTTG CCGGCCCGAC CGGTGTGGGG
AAAACAGAGT TAACTCAACA GTTGGCGAAA CACCTCGATA TTGAGCTGCT ACGGTATGAC
ATGTCTGAAT ACATGGAGCG TCATTCCGTT TCTCGTTTGA TTGGTGCGCC GCCGGGCTAC
GTTGGTTTTG ATCAAGGTGG TTTATTAACG GAAGCCGTTA ATAAACACCC ACATTCTGTT
GTTTTATTGG ATGAGATTGA AAAAGCGCAT CCAGATGTCT TTAACCTGTT GTTGCAGGTG
ATGGATAATG GGACTTTAAC AGACAATAAT GGACGCAAAG CTGATTTTAG AAATGTCATT
TTGATTATGA CGTCGAATGT CGGAGCAGAA GCCGCGTCAC GAGCCAGTAT CGGGTTTGCA
GTACAAGATC ACAGTCTGGA CTTCCAAGGG GAATTGAAAA AAGTGTTTAC GCCCGAGTTC
CGTAATCGCC TGGATGGTGT GGTTCAGTTT AATCGCTTGT CTCCTGAAGT GATGAACTCT
GTCGTGAATA AATTCATTTA TGCGCTTGAA AACAGTTTGC AAGACAAAAA AGTGTCAATT
AAATTAACGG CCTCGGCACG TGAATGGCTG GCAAAAGAAG GTTATGATCC ATTTATGGGC
GCTAGACCAA TGTCTCGTCT GGTTCAAGAA AAGATCAAAC AGCCTTTGGC TGAGATGTTG
TTGTTTGGTG AGCTTCAATC CGGTGGTGAA GTGGTGATTG ATGCCGATGA ATCCGGTATT
GTGCTGCACG CTGAGGAGTT GGTTTAA
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| Protein sequence | MLSKELQLTL SNAFSLANEY EHEYVTLEHL LLELLGLPSV REAIEACGVK LTTIESELEK
YLDGEAAGIK TEELLPTMAF QRVIERAIYL VQSNGYTEVT GLHVLASIFS EQDSHAVYVL
ESCGVHRVDI LSYISHGVTA QQQEDFLTSS PSEESIEDAE AGESENNPIT NYSVNLNEEV
EMGRIDPIIG REWELTRTLE VLSRRRKNNP LLVGEPGVGK TAVAEGLAHR IVEKKVPEQL
MDAEIFSLDM GALLAGTRYR GDFEKRFKAL LKALEERPHA ILFIDEIHTI VGAGAVQGGA
MDASNLMKPA LSSGKLRCVG ATTYEEYRGI FEKDRALARR FQKIDVHEPT TQETFEILKG
LKSQFESHHH VKYTLPALKM AVDLSARYIN DRHLPDKAID VIDEAGAKQA LMPKSKRKKQ
ISVAEIQQIV ANIARIPVSQ ITQKEKDKLM NLEESLQRVV FGQDEAVHSV VSAIKLARSG
LNEGDRPTAS FLFAGPTGVG KTELTQQLAK HLDIELLRYD MSEYMERHSV SRLIGAPPGY
VGFDQGGLLT EAVNKHPHSV VLLDEIEKAH PDVFNLLLQV MDNGTLTDNN GRKADFRNVI
LIMTSNVGAE AASRASIGFA VQDHSLDFQG ELKKVFTPEF RNRLDGVVQF NRLSPEVMNS
VVNKFIYALE NSLQDKKVSI KLTASAREWL AKEGYDPFMG ARPMSRLVQE KIKQPLAEML
LFGELQSGGE VVIDADESGI VLHAEELV
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