Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1099 |
Symbol | |
ID | 3760711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1181351 |
End bp | 1182490 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785820 |
Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
Protein accession | YP_391368 |
Protein GI | 78485443 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAT CAAAACAAGA CAATTCAAAC ATTAAAGTCA TCGTCGGACT GTCCGGCGGT GTGGATTCTT CCGTCACGGC CTTGTTGCTT AAGCAGCAAG GTTATGATGT GGAAGGATTA TTCATGAAAA ACTGGGAAGG CGATGACACC GAAGATTATT GCCCGGCCGC TGAAGATTTA AAAGACGTTT TAGCCATATG TGAGAAACTC GACATTCCGT TGCACGTGGA AAATTTTTCA GGTGAATATT GGGATCGGGT TTTTGAACAC TTCCTTGCAG AATACCAATC AGGTCGAACG CCCAATCCTG ATATCCTGTG TAATAAAGAA GTGAAATTCA AAGCTTTTTT AGAGCATGCC ATGACATTGG GTGCCGATTA TATTGCCACC GGTCATTATG CTCGTATCAG CCGAGACGAA AATGGACAAT GCTATTTATT AAAAGGGCTG GACAACAATA AAGACCAAAG CTATTTTCTT TACACGCTGC AGCAGCACCA ATTATCGAAA TCCATGTTCC CGATTGGCGA ATTGGAAAAG CCTTACGTTC GACAGTTAGC CGAAGAAGCG GACTTGATCA CGCATGATAA AAAAGACAGT ACCGGAATCT GTTTTATCGG AGAACGTAAG TTCAAAGATT TCCTACAGCA GTTTTTACCG GCTCAACCGG GTGACATCGT CAACACCGAA GGCGAGGTTA TCGGTCATCA TGAAGGGTTG ATGTATCACA CGCTTGGCCA ACGAAAAGGC TTGGGCATTG GCGGTGGCTT TGGCGACTCT GGGTTGCCTT GGTTTTCGGC CGATAAAAAT CTGGAAACAA ATCAACTGAT TGCCGTACAA GGATCGGACC ACCCTTTATT GAACCATGCG TTTTTAACGG CCGACACCTG TGATTGGGTA TCTGGTCACT GCCCTGCATT AAAGCAAGCC TTGAAAGCCA AAGTCCGTTA TCGTCAACCG GAACAGCCTT GCCAAATCCT TTCTGAGAAG AATGGCGAGA TTATTGTACA ATTTGATGAA GAACAAACGG CTATTACACC CGGACAATCC GTCGTGTTTT ATGAGGGTGA AACCTGTTTA GGCGGTGCCA TTATTACCGG GCGCTACCAT TCTTTATCTG AAATCAACGA AGACAAGTAA
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Protein sequence | MQTSKQDNSN IKVIVGLSGG VDSSVTALLL KQQGYDVEGL FMKNWEGDDT EDYCPAAEDL KDVLAICEKL DIPLHVENFS GEYWDRVFEH FLAEYQSGRT PNPDILCNKE VKFKAFLEHA MTLGADYIAT GHYARISRDE NGQCYLLKGL DNNKDQSYFL YTLQQHQLSK SMFPIGELEK PYVRQLAEEA DLITHDKKDS TGICFIGERK FKDFLQQFLP AQPGDIVNTE GEVIGHHEGL MYHTLGQRKG LGIGGGFGDS GLPWFSADKN LETNQLIAVQ GSDHPLLNHA FLTADTCDWV SGHCPALKQA LKAKVRYRQP EQPCQILSEK NGEIIVQFDE EQTAITPGQS VVFYEGETCL GGAIITGRYH SLSEINEDK
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