Gene Tcr_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1094 
Symbol 
ID3760596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1176417 
End bp1177739 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content46% 
IMG OID637785815 
Productadenylosuccinate synthetase 
Protein accessionYP_391363 
Protein GI78485438 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.562394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAA AAAATATTGT CGTTGTCGGT ACTCAGTGGG GCGATGAAGG TAAAGGAAAG 
ATTGTTGATT TATTAACAGA TAGAGTTGCT GCGGTGGTTC GTTTTCAAGG CGGGCACAAT
GCAGGTCATA CGTTGGTTAT TGATGGTAAA AAAACCGTTT TGCATTTAAT TCCCTCAGGT
ATTTTGCGTG AAGACGTGGA ATGCTTTATT GGTAATGGTG TCGTTCTTGC ACCGGAAGCA
TTGGAAAAAG AAGTCGCTCA ATTGGAAGAC ACTGGGTTGA AAGTCAAGCA TCGTTTAAAA
ATCAGTGATG CGTGTCCTTT GATTCTGGAT TACCACGTTG CTTTGGATCA GGCCAGAGAA
TTGGCTCGAG GCAATAAAGC CATTGGTACC ACGGGGCGGG GGATTGGTCC AGCTTATGAA
GATAAGGTTG CAAGACGCGG ATTGCGTGCT GGTGACCTAA AAAATATGTC TCAGCTTAAG
CAAAAGTTGC AAACAGCCAT GGAATATCAT AATTACATGC TGACAAACTA CTACAAGGCC
GAACCTGTTG ATTTTGAAAC GTTATGGGCC AAATGCCAAG CCTATGCTGA TTTGATTGTC
CCTATGCTGG CCGATATTCC AAACTTGATT GACCTGTACA ATAAGGAAGG CAAAAATCTG
ATGTTTGAAG GGGCTCAAGG CACCTTGTTG GACATCGATC AAGGTACGTA TCCTTACGTT
ACCTCTTCTA ATACGACCGC AGGTGGAGCA GCTTCCGGCA GTGGAATCGG TCCGTGCCAG
TTAGATTATG TTTTGGGGAT CACTAAAGCC TATGCCACAC GTGTTGGCGG CGGGCCTTTC
CCGACTGAGT TACGATATGA TGTAGCGACC GATGAAGGCG ATGCCGTAGG TAAAGAATTG
GGGACGCGTG GTCGTGAATT TGGTGCGACA ACAGGGCGTC AGCGTCGTTG CGGTTGGTTT
GATGCGGTGG CGCTGCGTCG CTCAGCTCAA GTCAATGGGT TAACCGGTGT TTGTTTAACA
AAGTTAGACG TTCTAGACGA ACTTGAAGAA ATTAAAGTGT GTACGAAGTA TCGTAAAGAC
GGTCAGGATG TATTTTTACC ACCTTCCAGT GCGGATGAAT ATGAACTGGT TGAACCACAC
TATGAAACGT TGAAAGGGTG GAATACTTCA ACGGTCGGGA TTGATTCATG GGACGCTTTG
CCGGAAGAAG CCAAAGTGTA CATTCGTTTT TTAGAAAAAG AGATGGGTGT GACGGTTTCA
ATTCTGTCTA CGGGGCCAGA TCGTTCTGAA ACACTGGTTC TAGAAGATCC GTTCGAAGTG
TAA
 
Protein sequence
MVKKNIVVVG TQWGDEGKGK IVDLLTDRVA AVVRFQGGHN AGHTLVIDGK KTVLHLIPSG 
ILREDVECFI GNGVVLAPEA LEKEVAQLED TGLKVKHRLK ISDACPLILD YHVALDQARE
LARGNKAIGT TGRGIGPAYE DKVARRGLRA GDLKNMSQLK QKLQTAMEYH NYMLTNYYKA
EPVDFETLWA KCQAYADLIV PMLADIPNLI DLYNKEGKNL MFEGAQGTLL DIDQGTYPYV
TSSNTTAGGA ASGSGIGPCQ LDYVLGITKA YATRVGGGPF PTELRYDVAT DEGDAVGKEL
GTRGREFGAT TGRQRRCGWF DAVALRRSAQ VNGLTGVCLT KLDVLDELEE IKVCTKYRKD
GQDVFLPPSS ADEYELVEPH YETLKGWNTS TVGIDSWDAL PEEAKVYIRF LEKEMGVTVS
ILSTGPDRSE TLVLEDPFEV