Gene Tcr_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1088 
Symbol 
ID3760590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1169663 
End bp1170652 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content41% 
IMG OID637785809 
ProductABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like 
Protein accessionYP_391357 
Protein GI78485432 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.212665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGA TACTTCTAAA AAAAACGAAG TGGGCAATTT TTTTATTAAG CTTGTTGAGT 
GGGCTGGTGT TGTCATCGTG TGCTTCCAAA CCTCAACAAG AATTGCGTAT CAGTTCACTG
CTTTGGCCCG GTTATGAACC GCTTGTGCTG GCGGAAAAGC TTGGCTATTT TCAAAAAGCC
CCGATTAAAA TTCTGGATTA CCTCTCTAAT ACCGATGCCA TAGCTGCGTT TAAAAATCAT
AGCTTAGAAG CCGGCGCGTT TACGCTTGAT GAAACCTTGC AGCTCTTATC CGATGGTGTC
GATATTCAAA TTGTTTTGAT TATGGATACG TCTGATGGTG GAGATGTGAT TTTGGCGAAT
CCCGATATTC AATCCATATC AGACTTGAAA GGGCATCCCG TTGCTGTTGA AAGTTCTGCC
GTAGGCGCTT ATGTGTTACA ACGGGCTCTA GAATTAAATG GCCTTACGTT GGATGATATT
GACGTTATTT CCACACATGC AATGGAGCAA CAGCAAGCCT TTAAGAATGG CGAAGTCGTT
GCCGCTGTGA CTTTCGACCC ATATCGTACC GAGTTAATTC AAGACGGTAA ACATTCTATT
TTTAACTCCA AAAGCATTCC AAATGAAATC ATCGATGTGT TGGTGGTGCG AACGGATGTG
GTCGAGAATA ATCCAAAGGT GATTCGTCAG TTGATTCAAG GTTGGTTTAA AGCGTTAGCC
TTTCAAAAAG CAAATCCTAA AAAAGCAGCC GAATATGCTT TGCCCCGTTA TAAAGTGTCA
ACAGAAGAGT ATCTAAAATC CCTTTCAGGA CTTAAATTTA CCACACTGAA AGAAAACAAA
ACCTTGTTGG ATCGTCAGGC AAGTCCGCTT TACGAGTTGG AACCTAAATT GAAAAAAACG
TTGTCTAGTT TAGGGTTGGT CAATCAAGTC GATCATGACA CATTATTGCT TTCCAATCAC
TTGAACGGTC GCTTTCTTCC AAATGAATAG
 
Protein sequence
MLMILLKKTK WAIFLLSLLS GLVLSSCASK PQQELRISSL LWPGYEPLVL AEKLGYFQKA 
PIKILDYLSN TDAIAAFKNH SLEAGAFTLD ETLQLLSDGV DIQIVLIMDT SDGGDVILAN
PDIQSISDLK GHPVAVESSA VGAYVLQRAL ELNGLTLDDI DVISTHAMEQ QQAFKNGEVV
AAVTFDPYRT ELIQDGKHSI FNSKSIPNEI IDVLVVRTDV VENNPKVIRQ LIQGWFKALA
FQKANPKKAA EYALPRYKVS TEEYLKSLSG LKFTTLKENK TLLDRQASPL YELEPKLKKT
LSSLGLVNQV DHDTLLLSNH LNGRFLPNE