Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1088 |
Symbol | |
ID | 3760590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1169663 |
End bp | 1170652 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637785809 |
Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like |
Protein accession | YP_391357 |
Protein GI | 78485432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.212665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATGA TACTTCTAAA AAAAACGAAG TGGGCAATTT TTTTATTAAG CTTGTTGAGT GGGCTGGTGT TGTCATCGTG TGCTTCCAAA CCTCAACAAG AATTGCGTAT CAGTTCACTG CTTTGGCCCG GTTATGAACC GCTTGTGCTG GCGGAAAAGC TTGGCTATTT TCAAAAAGCC CCGATTAAAA TTCTGGATTA CCTCTCTAAT ACCGATGCCA TAGCTGCGTT TAAAAATCAT AGCTTAGAAG CCGGCGCGTT TACGCTTGAT GAAACCTTGC AGCTCTTATC CGATGGTGTC GATATTCAAA TTGTTTTGAT TATGGATACG TCTGATGGTG GAGATGTGAT TTTGGCGAAT CCCGATATTC AATCCATATC AGACTTGAAA GGGCATCCCG TTGCTGTTGA AAGTTCTGCC GTAGGCGCTT ATGTGTTACA ACGGGCTCTA GAATTAAATG GCCTTACGTT GGATGATATT GACGTTATTT CCACACATGC AATGGAGCAA CAGCAAGCCT TTAAGAATGG CGAAGTCGTT GCCGCTGTGA CTTTCGACCC ATATCGTACC GAGTTAATTC AAGACGGTAA ACATTCTATT TTTAACTCCA AAAGCATTCC AAATGAAATC ATCGATGTGT TGGTGGTGCG AACGGATGTG GTCGAGAATA ATCCAAAGGT GATTCGTCAG TTGATTCAAG GTTGGTTTAA AGCGTTAGCC TTTCAAAAAG CAAATCCTAA AAAAGCAGCC GAATATGCTT TGCCCCGTTA TAAAGTGTCA ACAGAAGAGT ATCTAAAATC CCTTTCAGGA CTTAAATTTA CCACACTGAA AGAAAACAAA ACCTTGTTGG ATCGTCAGGC AAGTCCGCTT TACGAGTTGG AACCTAAATT GAAAAAAACG TTGTCTAGTT TAGGGTTGGT CAATCAAGTC GATCATGACA CATTATTGCT TTCCAATCAC TTGAACGGTC GCTTTCTTCC AAATGAATAG
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Protein sequence | MLMILLKKTK WAIFLLSLLS GLVLSSCASK PQQELRISSL LWPGYEPLVL AEKLGYFQKA PIKILDYLSN TDAIAAFKNH SLEAGAFTLD ETLQLLSDGV DIQIVLIMDT SDGGDVILAN PDIQSISDLK GHPVAVESSA VGAYVLQRAL ELNGLTLDDI DVISTHAMEQ QQAFKNGEVV AAVTFDPYRT ELIQDGKHSI FNSKSIPNEI IDVLVVRTDV VENNPKVIRQ LIQGWFKALA FQKANPKKAA EYALPRYKVS TEEYLKSLSG LKFTTLKENK TLLDRQASPL YELEPKLKKT LSSLGLVNQV DHDTLLLSNH LNGRFLPNE
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