Gene Tcr_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1033 
Symbol 
ID3760743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1108089 
End bp1109120 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content47% 
IMG OID637785754 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionYP_391302 
Protein GI78485377 
COG category[C] Energy production and conversion 
COG ID[COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 
TIGRFAM ID[TIGR01946] electron transport complex, RnfABCDGE type, D subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000831458 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCA TTCCGCATAC CTCTCCATTT ACCCATAACG CCAGCAGCGT TAGAAAAGTA 
ATGCTACAAG TGCAAATTGC TGCTTTTCCG GCATTGATGA CGCACATCTA TTTTTTCGGA
TTCGGCATTA CCATTCAATG GACGTTAGCG GTACTTACCC TAATCATAGT GGAAACCACG
TTATTAAAAT TACGTGACCG CCCTGTCGCA CCCTACTTAT TTGATTTAAG TGGTCTGATT
ACGGTTACAG GGATCGTATT CTGTATTCCA CCGGAAGCGC CTTGGTGGGT AATTGTCTCA
GGGGTGACGT TTGCACTCAT TTTCGGAAAA CACCTTTATG GTGGTTTAGG CTATAACCCT
TTTAACCCGG CCATGCTAGG CTATGCCTTC TTATTGATTT CCTTTCCCGC CGAATTAACC
CAGTGGACAC TGCCATCCGA AGTGTCCGGT CATCACATCA GTTTCATTGA ATCGTTCCAT
TTAATTTTTA CCGGACAATC ATTGAACTTA TCTTTTGACC AACTCACGGG CGCCACGCCA
CTTGATGAAG TAAAAACGGC GTTATCCATG GGAGTGCCTG TGACCACCAC GCTCAACAGT
TCTAACTTTA ATGGCGAACA AATCCCTTAT GGTTGGGCAT GGATTAATAT GGCTTTTTTC
CTCGGTGGGT TATGGATGTT GTATAAACGC GCTATCCGCT GGCAGTATCC GGTCGGTTTC
TTAGGCACCT TAGCGGCCAT TGCCTATCTC TTTAACTGGA TCGATCCGAA CACTTATGCC
CCAGCCAGCT TTCATTTATT AACGGGCGGC ATCATGTTAG CGGCGTTCTT TATCATTACC
GACCCTGTGA CTTCTAGCAC CACGCCGCTT GGCCGATTTG TTTACGCCGC CGGCATTGCC
GTGCTGGTGT ATGTCATCCG AAACTGGGGA GCTTTCCCGG ATGGCATTGC ATTTGGGATC
TTAATTATGA ACATGTTTGT TCCTTTAATT GACCAATACA CTCAACCGCG TGTCGTCGGG
TATCGGAGAT AA
 
Protein sequence
MATIPHTSPF THNASSVRKV MLQVQIAAFP ALMTHIYFFG FGITIQWTLA VLTLIIVETT 
LLKLRDRPVA PYLFDLSGLI TVTGIVFCIP PEAPWWVIVS GVTFALIFGK HLYGGLGYNP
FNPAMLGYAF LLISFPAELT QWTLPSEVSG HHISFIESFH LIFTGQSLNL SFDQLTGATP
LDEVKTALSM GVPVTTTLNS SNFNGEQIPY GWAWINMAFF LGGLWMLYKR AIRWQYPVGF
LGTLAAIAYL FNWIDPNTYA PASFHLLTGG IMLAAFFIIT DPVTSSTTPL GRFVYAAGIA
VLVYVIRNWG AFPDGIAFGI LIMNMFVPLI DQYTQPRVVG YRR