Gene Tcr_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1030 
Symbol 
ID3760740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1106063 
End bp1106695 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID637785751 
Productendonuclease III 
Protein accessionYP_391299 
Protein GI78485374 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000000273588 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC AAAAACGCTT AGAAATTTTT CAACGCTTAT CAGAAGCCAT TCCAGAACCG 
GAAACAGAAC TGAATTACAG CACGCCTTTC GAGCTGCTTA TTGCTGTGAT CTTATCGGCA 
CAGGCCACAG ATAAAGGTGT CAATATTGCC ACCGACAAAT TGTTTCCGGT CGCCAATACA 
CCGGAAGCCA TCTATGCGTT AGGCGAAGAA GGACTGAAAG AATACATTAA AACCATTGGG 
CTGTTTAATA CCAAAGGCGC CAACATTATC AAAACCTGCA AAATGCTGAT TGATTTGCAC 
AACTCTCAGG TGCCCGATAA TCGAAAAGAC CTAGAAGCTT TACCAGGTGT TGGTCGTAAA 
ACCGCCAATG TCGTTTTGAA CACCGCCTTT GGTCACCCCA CTATGGCAGT CGACACTCAT 
ATTTTTCGGG TATCGAACCG CACCAAGCTC GCGCCGGGCA AAAATGTCTT AGAAGTCGAA 
CAAAAGCTTT TGAAAAACGT ACCGAAAGAA TACATTATTC CAGCCCATCA CTTACTGATT 
CTCCATGGAC GCTACACTTG TACCGCTCGT AAACCTAGAT GTGGTGCTTG TTGCATTTAC 
GATTTATGTG AATACAAAGA GAAGACGGCT TAA
 
Protein sequence
MNKQKRLEIF QRLSEAIPEP ETELNYSTPF ELLIAVILSA QATDKGVNIA TDKLFPVANT 
PEAIYALGEE GLKEYIKTIG LFNTKGANII KTCKMLIDLH NSQVPDNRKD LEALPGVGRK 
TANVVLNTAF GHPTMAVDTH IFRVSNRTKL APGKNVLEVE QKLLKNVPKE YIIPAHHLLI 
LHGRYTCTAR KPRCGACCIY DLCEYKEKTA