| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1021 |
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| Symbol | |
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| ID | 3760731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1098984 |
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| End bp | 1099886 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785742 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_391290 |
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| Protein GI | 78485365 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000548579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGTC TTGAGCAAAT GCCCGCTGTT CTTGATGCGT TGCCGGATCC GGCGTTTCTG
TTTTCAAGAA GCGGTAAATA TGTCGCCGTT TACGGTGGTC GCGACAACCG TTATTACCAT
GACGGCAGTG GTCTTGTTGG ATTGTACATC GCTGATTTGA TTGAAGTGGA AAAAGCGAAC
TGGTTTCTAG GAAAAATTGA AGAAGCTTTG GAATCTAAAA AACTGTTGAT TGAGGAGTAT
GAACTCAGTA ACAAAGATGT GAAAGGGTTG TCAGATGAGG GGCCGCAAAA CCCTATTTGG
TTTGAGGGGC GTATTCAAGC ACTGGATTTT CTTGTCGACG GTGAAGACGT GGTTTTATGG
GTGGCGAGTA ATATTTCTGA ACGACACGAT TTGGAAATTA AACTACGGCA ATTGGGTGAC
ACCGACCAAC TGACCGGTAT TTTCAACCGA AGACGACTGG AACATGATTT CCCTTTGCAT
TTTGAATCCT TTACGCAACA TTCCACGCCA ACGTCCGTCT TGATGTTTGA TCTGGATAAT
CTAAAGCAGG TTAATGACCG CTTTGGGCAT CATGCTGGCG ATAACGTTAT TCTAGCGGTC
ACCCGAATCT GTCAGTCTCA TTTAAGCCGT AACGATGTCG CCTGTCGTTT TGGTGGTGAC
GAATTCATTG TTGTTTTGCC AGGGTCGGAT TTGGAAGAGG CGGTTCAATT ATCAGAAGGC
CTGGCCGACG AGTTCAAGCA GGGGTTAAAA CCATTTTGCG TTGATGGCAT TAAAGTCAGC
GTCAGCATGG GCATTACAAC GATTAAGCCG GAAGATAAGT CGTATCAAGA CACGCTAAAC
CGTGTCGACA AAGCGTTATA CACCGCCAAG AAAAACGGTA AAAACCAAAT CGTTATCGAA
TGA
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| Protein sequence | MISLEQMPAV LDALPDPAFL FSRSGKYVAV YGGRDNRYYH DGSGLVGLYI ADLIEVEKAN
WFLGKIEEAL ESKKLLIEEY ELSNKDVKGL SDEGPQNPIW FEGRIQALDF LVDGEDVVLW
VASNISERHD LEIKLRQLGD TDQLTGIFNR RRLEHDFPLH FESFTQHSTP TSVLMFDLDN
LKQVNDRFGH HAGDNVILAV TRICQSHLSR NDVACRFGGD EFIVVLPGSD LEEAVQLSEG
LADEFKQGLK PFCVDGIKVS VSMGITTIKP EDKSYQDTLN RVDKALYTAK KNGKNQIVIE
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