| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1003 |
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| Symbol | |
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| ID | 3760489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1082007 |
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| End bp | 1083791 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637785724 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_391272 |
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| Protein GI | 78485347 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.851611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA TTGTTGACAT CCTGATTCCA GATATCGGTG ACTTTGCAGA AGTCGATGTA
ATCGAAGTAT TAGTCTCTGC TGGCGAAGAA ATCATTCAGG ATGACTCTTT ATTAACCCTA
GAGTCAGATA AAGCCACCAT GGAAATTCCT GCGCCTTACG CAGGTCGCGT GGTGGAAATG
AATGTTGATG TGGGTGACAA AGTCAAAGAA GGCTCTGTCG TGGGTAAAAT CGAAATTGCC
GACGTGGAAA CCGTTTCGTC TAATGTCGAA GAAAGCGTTA CCCCAGAACC AACCCCTGAA
AAAACTGATC AAAAAACAAC TGAAACACCG GCGCCAAAAG CCGTTTCCGC GGCCGATTTG
CCGGATGCGG ATATGCAGTG TGACGTGTTG GTATTGGGCT CTGGCCCAGG TGGCTACACC
GCCGCATTCC GCGCCGCCGA TCTAGGTAAA AAAGTCGTGA TGATCGAACG TTACGAGTCT
ATCGGTGGGG TGTGTTTGAA TGTGGGTTGT ATTCCGTCTA AAGCGTTATT ACACATGTCC
GTCGTTTTAA ACGAAACTCG TGAAATGGGC GCGCATGGTA TTGAATTCGC CGAGCCGAAA
ATCGACACTA ACAAAATGCG TGCATTCAAA GATTCCGTCA TCGGTAAACT GACCGGCGGT
TTATCCGGCC TGGCTAAAGC CCGTAATGTG GACGTGGTTC AAGGGTACGG AAAATTCAGC
TCAGCCAATA CAGTAACGGT TGATTTGGCA GACGGTGGCA CCAAAACCAT CGCGTTTGAA
AATGCCATCA TCGCCGCCGG GTCGCGTGTG GTGAAACTGC CATTCATTCC GCATGACGAT
CCACGTGTTA TGGATTCTAC CGACGCATTG GAGCTGGAAG AAGTACCAAA ACGCATGCTG
GTTATCGGTG GCGGAATCAT CGGTCTGGAA ATGGCGCAAG TGTATGATTC ATTAGGATCA
AACATCACTG TTGTCGAACT GGGTGACACC ATCATTCCAG GCGCGGATAA AGACATCTCT
AAGCCATTGC TGAGAAGAAT CAAAAAGAAA TACGAAAACA TCTACCTGAA ATCAAAAGTC
ACCAATGTCG AAGCCAAAGA AGAAGGCCTA GTGGTGACGT TTGAAGGTAA AGACTGCCCG
GAAACCGATA CGTTTGATCG TATCCTTGTT GCGGTCGGTC GTGCGCCAAA TGGTAAGCTG
ATTGATGCCG AAAAAGCTGG TGTGGCCGTG AATGACTGGG GCTTCATCGA AGTGGATGAG
CGTCAAAAAA CCAATGTCGA TCACATCTAC GCGATTGGTG ACATTGTCGG CCAACCAATG
CTGGCTCACA AAGCCGTGCA TGAAGGTAAA GTGGCCGCTG AAGTCATTAA CGGCATGCCA
AGCGCGTTTA CGCCAATGGG CATTCCATCT GTGGCCTATA CCGATCCAGA AGTCGCTTGG
GCGGGTAAAA CCGAAGATGA GCTGAAAGCC GAAGGCATTG AATACGAAAA AGGCGCATTC
CCATGGGCCG CCTCGGGTCG TAGCTTAAGC CTAGGGCGAG ACGAAGGGCT TACCAAAGCC
TTGTTCTGTG CCGAAACGCA TCGTTTACTC GGCTGCGGTA TTGTCGGGCC TAACGCCGGT
GAGCTGGTGG CAGAAGCCAT GCTCGCCATC GAAATGGGTG CCGACATGCA AGACATCGGT
CTCACCATTC ATCCGCATCC AACGCTGTCA GAAACTTTAT GTTTCGCAGC CGAGATGGCG
GAAGGGACGA TTACCGATCT GATGCCTCCG AAAAAGAAAA AATAG
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| Protein sequence | MSKIVDILIP DIGDFAEVDV IEVLVSAGEE IIQDDSLLTL ESDKATMEIP APYAGRVVEM
NVDVGDKVKE GSVVGKIEIA DVETVSSNVE ESVTPEPTPE KTDQKTTETP APKAVSAADL
PDADMQCDVL VLGSGPGGYT AAFRAADLGK KVVMIERYES IGGVCLNVGC IPSKALLHMS
VVLNETREMG AHGIEFAEPK IDTNKMRAFK DSVIGKLTGG LSGLAKARNV DVVQGYGKFS
SANTVTVDLA DGGTKTIAFE NAIIAAGSRV VKLPFIPHDD PRVMDSTDAL ELEEVPKRML
VIGGGIIGLE MAQVYDSLGS NITVVELGDT IIPGADKDIS KPLLRRIKKK YENIYLKSKV
TNVEAKEEGL VVTFEGKDCP ETDTFDRILV AVGRAPNGKL IDAEKAGVAV NDWGFIEVDE
RQKTNVDHIY AIGDIVGQPM LAHKAVHEGK VAAEVINGMP SAFTPMGIPS VAYTDPEVAW
AGKTEDELKA EGIEYEKGAF PWAASGRSLS LGRDEGLTKA LFCAETHRLL GCGIVGPNAG
ELVAEAMLAI EMGADMQDIG LTIHPHPTLS ETLCFAAEMA EGTITDLMPP KKKK
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