Gene Tcr_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0987 
Symbol 
ID3762165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1062860 
End bp1064116 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content47% 
IMG OID637785708 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_391256 
Protein GI78485331 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC TAGTCATTGA AGGGCCATGC CAGCTTGAGG GTTCGGTACA AATTTCAGGT 
GCAAAGAACG CGGCTCTGCC CATTTTGATG GGGTGCTTAT TATCTGAAAC ACCTGTCGTA
TTGTCTAATG TCCCGCATTT GAAAGATGTC ACAACCACCA TTCAGTTGCT TGCAACGATG
GGGGTTGAGG TGATGTTTGA TGAAGAGTTG AATATCGAAA TCGATGCCTC AAACATTACC
ACCAAAGAAG CGCCTTATGA ATTGGTCAAA ACCATGCGTG CGTCCATCTT GACAATGGGG
CCTCTGTTGG CTCGTTTTGG TGAAGCGAAA GTTTCATTGC CAGGTGGGTG TGCCATTGGG
TCGCGTCCAG TCAATATTCA TATTGAAGGG ATGCAGAAAA TGGGCGCCGA AATCAAAGTC
GAGCAAGGTT ATATTATTGC CACGGCGGAT CGTTTGGTGG GTGCGGACAT TACGATGGAA
CCCGTGACCG TCACGGGTAC TGAAAACCTG TTGATGGCGG CCGTATTGGC TGAAGGGCGT
ACCACGTTGA GAAATGCCGC GAAAGAGCCT GAAGTCTCTG ACCTGGCGCA TTTTTTAAAT
AAGATGGGCG CTAAAATTAC CGGAATTGAT ACGGATACGC TTGTGATTGA AGGGGTTGAA
AAACTGACCG GCGTGTCTTA TCGCGTGATT CCAGATCGAA TCGAAGCCGG TACCTACCTT
GCCGCCGCCG CTTTAACCAA AAGCTGTGTG ACCGTAAAGG ATGTTGTGCC GGAACACTTA
ACCGCTGTGT TAGATAAATT TACAGAAGCC GGCGCTTTGG TAACAACCAC GGACAACACC
ATTACATTGG ATATGCGTAA CCGTTCTTTG AAACCCGTCA ATATTGTCAC GGATCCTTAT
CCGGCTTTTC CAACCGATAT GCAGGCCCAA TTTGTCGTGA TGAATTGTTT GGCAGAAGGG
GAAGCGAATG TGGAAGAAAC CATTTTTGAA AACCGTTTCA TGCATGTTTC AGAGCTTGTG
AGAATGGGCG CAGACATTCA TGTTGAAGGG AATGTGGCTC ATACTAAAGG CGTGGATCAT
TTAATTGGCG CTCCGGTGAT GGCTACCGAT TTAAGAGCCT CGGCAAGTTT GATTTTGGCC
GGCTTGGTCG CAAAAGGCGA GACGGTTGTC AGTCGTATTT ACCATATTGA TCGTGGTTAC
GAACTGATTG AAGAAAAATT CCATAAGCTG GGTGCCCATA TTTACCGAGC AAATTAA
 
Protein sequence
MDKLVIEGPC QLEGSVQISG AKNAALPILM GCLLSETPVV LSNVPHLKDV TTTIQLLATM 
GVEVMFDEEL NIEIDASNIT TKEAPYELVK TMRASILTMG PLLARFGEAK VSLPGGCAIG
SRPVNIHIEG MQKMGAEIKV EQGYIIATAD RLVGADITME PVTVTGTENL LMAAVLAEGR
TTLRNAAKEP EVSDLAHFLN KMGAKITGID TDTLVIEGVE KLTGVSYRVI PDRIEAGTYL
AAAALTKSCV TVKDVVPEHL TAVLDKFTEA GALVTTTDNT ITLDMRNRSL KPVNIVTDPY
PAFPTDMQAQ FVVMNCLAEG EANVEETIFE NRFMHVSELV RMGADIHVEG NVAHTKGVDH
LIGAPVMATD LRASASLILA GLVAKGETVV SRIYHIDRGY ELIEEKFHKL GAHIYRAN