Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0969 |
Symbol | |
ID | 3761550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1047875 |
End bp | 1048555 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637785690 |
Product | two component transcriptional regulator |
Protein accession | YP_391238 |
Protein GI | 78485313 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.165699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAGCG AAACCATCTT AATTGTGGAA GATGAAATTA AAATTGCCAA TATTGTTCAA GAGTACTTAC AAGACAGTGG TTTTAAAACC GTGTGCATTG ATAACGGTTC GGACGTTTTG AGTTGGGTTC AAAACCATCC TGTCGATTTG ATTTTATTGG ATATTATGTT GCCGGGAAAA GATGGTTTGC AAGTTTGCAA AGAGGTTCGA ACCATAAGCC AGGTACCGAT TATTATGCTA ACGGCTAAAG TGGAAGAAAT TGATCGGATT TTAGGGTTGG AACTAGGGGC AGATGACTAT ATTTGTAAGC CGTTCAGTCC ACGAGAATTA GTCGCGCGTG TCAAAGCGTT GCTTCGACGG AGTTCTTTAC GACAAGAAAA TCACAGTACT GAAGATTGGC ACATGGATGA AGAGCGTTAT CAAGTCCGCT ATCAAGGAAA AACAGTCAAT TTATCCATGG TTGAGTTTGC GATTTTGAAG TTGTTGAGTA CCAGTCCCGG GCGCATATAC TCGAGAAGTC ATTTGATTGG GAGCATTTAT CCTGATAACC GAGTGGTTTC TGATCGCACG GTTGATAGTC ACATTAAAAA GCTGCGGCAT AAACTGGCCG AAGAATTGAC TTCAAAAGAA TTGATTTATT CCGTTTATGG TGTTGGTTAT AAGTTTGAGT TTCACACTTA A
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Protein sequence | MTSETILIVE DEIKIANIVQ EYLQDSGFKT VCIDNGSDVL SWVQNHPVDL ILLDIMLPGK DGLQVCKEVR TISQVPIIML TAKVEEIDRI LGLELGADDY ICKPFSPREL VARVKALLRR SSLRQENHST EDWHMDEERY QVRYQGKTVN LSMVEFAILK LLSTSPGRIY SRSHLIGSIY PDNRVVSDRT VDSHIKKLRH KLAEELTSKE LIYSVYGVGY KFEFHT
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