Gene Tcr_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0952 
Symbol 
ID3762049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1029543 
End bp1030121 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID637785673 
Productcytochrome c, class I 
Protein accessionYP_391221 
Protein GI78485296 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000198815 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTAA ATCGATGGAA ACTGAACCCT TTGGTGTTGA GTCTGACTGT TATGATGGGG 
GGCGCTTTGT TAGCCGCATG CAGTGACGAT TCACAACAAA AAGCGGCTGA AGCGGTTGAA 
GATGTCAAGC AATCGACCAG TGAAGCTTAT GAAGAGGCGA AAGAGACGAC TCAAGAGGTG 
ATGGACGAGA CGCAAGAAGC CGTTTCAGAT TCGGTGGATT CTGTAGAGGA AGCAACCGAA 
TCGGCAGGAG AAGCCGTATC TGATATGACT GAATCTGCCA ATGAAACGAC TAAAGACGCC 
ATAAATGAAG CCGCTGAAGA AGTGGATGAA GCTGTTACAA CGGCGTCTGT ATCTGGCCAA 
GAGGTGTACT CAACCTGTGT TGGTTGCCAT GGTGCAAGCG GTGAAGGCGG GGTAGGCCCG 
AAACTTTCTG GACAGGGCGA AGACGCATTG ATTGAAAAAT TAAAAACGTA TCGATCCGGT 
AAAGAAATTG GTCCTATGAG TGCGATGATG ATTCCAAACG CACAGCAATT GTCGGATGCA 
GAAATAGAAG CCGTTTCAAG TTACATTACA ACGTTTTAA
 
Protein sequence
MHLNRWKLNP LVLSLTVMMG GALLAACSDD SQQKAAEAVE DVKQSTSEAY EEAKETTQEV 
MDETQEAVSD SVDSVEEATE SAGEAVSDMT ESANETTKDA INEAAEEVDE AVTTASVSGQ 
EVYSTCVGCH GASGEGGVGP KLSGQGEDAL IEKLKTYRSG KEIGPMSAMM IPNAQQLSDA 
EIEAVSSYIT TF