Gene Tcr_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0900 
Symbol 
ID3761371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp978908 
End bp979717 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content44% 
IMG OID637785620 
ProductTPR repeat-containing protein 
Protein accessionYP_391170 
Protein GI78485245 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.1862e-11 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CGTTTTTCTT GGTCATTACA GCCGCAATAT TAAACAGTGT TATGCCTTTG 
GCAAATGCCG CACCTCAATC GATAGAAGAC CGTGTTGAAA GGCTCGAAAG AATGGCAAAT
AACCCTGTTC TCATTCAACT GAGCCGGCGT TTGGCAGAAC AGCAACGCCA AATTCAAAGC
TTATATGATG AAGTGGACCG TTTAAATTAC CAGTTAAAGC AAACTCAGGA CAAACTGGCT
AAACAGTATA AAGAAGCGGA TGAGCGTTTG AGTGTGCTTG AAACGTCACG AACTTCTACT
GCCGAAACAC AAGAAGGGTC GTCTTCATCG GTTCTTGTGC CAGAAGGAAC CTCTGGGGGG
ACGCAAAGTA AAGCCGTTAG TGCTCAGCCA TCTTCTGCTG CTACAGGTGT GACGACGCAT
GCGGCTACGG CCAAAGAAAA ACGTGCCTAT GAAGCGGCTT TTGCTTTAAT GAAAAAATCG
GATTATCAAG GTGCCAGTAA AGCGTTTTCG GCATTTAAGG CCACCTATCC TCACAGTGAC
TTAGCCAGCA ATTCAGCTTA TTGGGAAGGC GAGGCGGAAG CTGTTTTAGG GAATGATAAA
GCCGCTTTAA AAGCCTTTGT TGATGTGTAT GAAACTTACC CAACTTCGCT AAAAGCTCCT
GCAGCTATGC TAAGAGCTGC AGATATGTAT GATGATTTGG GTGACAAAAA GAAAGCGAAA
ACGTTATACG AAAAATTGAT TCAAGATTAC CCTAAAAAAA ATGTGGCGGA AAAGGCCCGT
AAAAGACTCT CGGCAATGGG AGTTAAATAG
 
Protein sequence
MKKTFFLVIT AAILNSVMPL ANAAPQSIED RVERLERMAN NPVLIQLSRR LAEQQRQIQS 
LYDEVDRLNY QLKQTQDKLA KQYKEADERL SVLETSRTST AETQEGSSSS VLVPEGTSGG
TQSKAVSAQP SSAATGVTTH AATAKEKRAY EAAFALMKKS DYQGASKAFS AFKATYPHSD
LASNSAYWEG EAEAVLGNDK AALKAFVDVY ETYPTSLKAP AAMLRAADMY DDLGDKKKAK
TLYEKLIQDY PKKNVAEKAR KRLSAMGVK