| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0890 |
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| Symbol | |
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| ID | 3761361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 969312 |
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| End bp | 971102 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785610 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_391160 |
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| Protein GI | 78485235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000708268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGTA CACACTACTG TGGACAAGTA ACAGAGATTT TAGAAAACCA GCAAGTCACC
GTTTCAGGGT GGGTTCACCG ACGCCGTGAC CACGGTGGCG TTATCTTTAT TGATTTACGT
GATCGTGAAG GGTTGGTCCA AGTAGTGGTA AATCCTGACA ATGCAGAGAT GTTTGCGATT
GCTGAACGTG TCCGTTCGGA ATACGTTTTG AAAGTCGAGG GTAAGGTCTG CGCCAGAACC
CCAGAAACAA TTAATCCAAA AATGAATACC GGTAAGATTG AAATTGTCGC TGAAAGCCTG
GAAGTGTTGA GTTCTGCAGA GCCGATTCCT TTTCAGCTGG ATGATAAGCA TATTTCGGAA
GAAGTTCGCC TGACTTATCG TTATTTGGAC TTGCGTCGCG AAGAAATGCA GTCGACCATG
CGAACGCGTT ATCGAGTGAC GCGTTCTATG CGTCGTTACT TGGATGATAA TGGTTTCATG
GATATGGAAA CACCTATCCT GACGAAATCA ACGCCGGAAG GGGCGCGTGA TTATTTAGTG
CCAAGCCGTA CACATCCAAA TAAGTTTTTT GCTTTACCGC AATCGCCTCA ATTGTTTAAG
CAATTGTTGA TGATGTCAGG GTTTGATCGT TATTACCAAA TTACTCGCTG TTTCCGTGAT
GAAGACTTGC GTGCAGATCG TCAACCTGAG TTTACACAGT TGGATATCGA AACCTCTTTC
ATGACAGAAG AAGAAGTGAT GAATATGATG GAAGGGTTAA CGAAAACGAT CTTTAGAGAA
GGTGTTGACG TTAATTTTGA AGACGACTTT CCACGTATGA CGTATGCAGA AGCCATTGAG
AAATATGGGA TTGATCGTCC GGATTTGCGT ATTCCATTGC AATTGGTTGA TGTGGCTGAT
TTGTTGCAGG ATATTGACTT TAAAGTGTTT GCGGGTCCAG CGAAAGATCC GATGGGGCGT
GTGGCGGCTT TACGTGTGCC ACAAGGTGGA AAATTATCAC GTAAAGAAAT TGACGACTAC
ACCAAGTATG TCGGTATTTA CGGTGCCAAA GGATTGGCGT ATATTAAGGT AAATGATTTA
TCTGCTGGCC TGGATGGCTT ACAGTCTCCG ATTGTAAAAT TCTTCCCGGA CCAGGCGATG
GAAATCATGC AGCGTGTTGG TGCCGAAGAT GGTGATATCG TTTTCTTTGG TGCGGATAAT
GCAAAGATTG TCAATGAAGC GTTAGGCGCA TTGCGTTGTA AGATTGGTGA AGATCTGGAC
ATGATCGAAA AAGAATGGGC CCCTGTCTGG GTGGTTGATT TCCCAATGTT TGAAATGGAT
GAGAAAACTG CCAAAATGAC GGCGATACAC CACCCATTCA CGCAACCTAA AGCGACAACA
GAAGAAATCT TAAACCATGA CGAACCGCAT CAAATGCTGT CTCGTGCTTA TGACTTGGTC
ATTAACGGTA TCGAAGTCGG AGGTGGTTCG GTTCGTATTC ATGACACGCA TATGCAAGCC
GCAGTTTTAA AAATGTTGGG CATTTCAGAT GAAGACGCGC AAGAGAAGTT TGGTTTCTTG
TTGAATGCTT TAAAATATGG CTGTCCTCCA CATGCCGGTA TGGCCTTTGG TTTAGATCGT
CTGGTGATGT TAATGGCCAA GCGCGATTCA ATTCGTGATG TTATTGCTTT CCCGAAAACG
CAATCAGCCG CCTGTATGCT GACAGATGCC CCAGGTAATG TCGACAATAC TCAGTTAGCG
GATCTTGAAT TACGTTTCCG TAAGTCTCTT GTGGCAAAAG ACGCGAGTTA G
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| Protein sequence | MMRTHYCGQV TEILENQQVT VSGWVHRRRD HGGVIFIDLR DREGLVQVVV NPDNAEMFAI
AERVRSEYVL KVEGKVCART PETINPKMNT GKIEIVAESL EVLSSAEPIP FQLDDKHISE
EVRLTYRYLD LRREEMQSTM RTRYRVTRSM RRYLDDNGFM DMETPILTKS TPEGARDYLV
PSRTHPNKFF ALPQSPQLFK QLLMMSGFDR YYQITRCFRD EDLRADRQPE FTQLDIETSF
MTEEEVMNMM EGLTKTIFRE GVDVNFEDDF PRMTYAEAIE KYGIDRPDLR IPLQLVDVAD
LLQDIDFKVF AGPAKDPMGR VAALRVPQGG KLSRKEIDDY TKYVGIYGAK GLAYIKVNDL
SAGLDGLQSP IVKFFPDQAM EIMQRVGAED GDIVFFGADN AKIVNEALGA LRCKIGEDLD
MIEKEWAPVW VVDFPMFEMD EKTAKMTAIH HPFTQPKATT EEILNHDEPH QMLSRAYDLV
INGIEVGGGS VRIHDTHMQA AVLKMLGISD EDAQEKFGFL LNALKYGCPP HAGMAFGLDR
LVMLMAKRDS IRDVIAFPKT QSAACMLTDA PGNVDNTQLA DLELRFRKSL VAKDAS
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