| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0888 |
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| Symbol | |
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| ID | 3761359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 967448 |
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| End bp | 968293 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637785608 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_391158 |
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| Protein GI | 78485233 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.212887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACA CACAAACGAT TTTAGTTACA GGCTGCTCCA GTGGCATTGG CTATCACGCC
GCAAAAACAT TGTCCCAAAA AGGCTATCAA GTCATCGCAA CCTGTCGACA AGAAGAAGAT
GTGGCGCGAC TCAATCAGGA AGGCCTTACT TGTGTTCAAA TGGATTTAGC CGACTCAGCC
TCTATCCAGA CAGCCGTCCA ACTCATCTTA GCCATACACC CTGTCATTGA CGTGTTGTTC
AACAATGCCG CATTCGGCCT ACCCGGAGCG GTAGAAGATT TAAGTCGCGA TGCACTGCGC
TTTCAGTTTG AAACCAATGT GTTTGGCACC CAAGAGCTGA CCAACCATAT CATTCCCGTC
ATGCGCGCTC AAAGGTATGG AAAAATAGTC TATAACAGTT CAATCTTAGG GTTTGCCGCC
ATGCAATATC GTGGCGCTTA CAATGCAAGT AAGTTTGCCA TTGAAGGCCT TGCAGATACA
CTCAGACTCG AACTTAAAGC CGATAACATT CAAGTCAGTT TAATTGAGCC TGGCCCAATC
AGCTCTAGCT TTCGCGCAAA CGCTTACACG CAATTCAAAC GCTGGATTCA ACCCGACCAG
AGCGCACACC AAAAAAATTA CCAAGCGATG ATTAATCGAC TGGAAACCGT CGGGCCTTCA
GCACCTTTTA CCTTAGGACC CGAAGCGGTG ACGAACAAGC TTGAAGCCAT CATTAACAGT
CACCGTCCGG CAGTTCGTTA TCGTGTAACC GTCCCCACCA TCGTCTTTGC CTGGTTAAAA
AGATTCTTAC CCAGCCGATG GCTAGATTTT CTTCTTATCA AGGCAGGTGG AGATGGCAAA
CGCTAA
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| Protein sequence | MQDTQTILVT GCSSGIGYHA AKTLSQKGYQ VIATCRQEED VARLNQEGLT CVQMDLADSA
SIQTAVQLIL AIHPVIDVLF NNAAFGLPGA VEDLSRDALR FQFETNVFGT QELTNHIIPV
MRAQRYGKIV YNSSILGFAA MQYRGAYNAS KFAIEGLADT LRLELKADNI QVSLIEPGPI
SSSFRANAYT QFKRWIQPDQ SAHQKNYQAM INRLETVGPS APFTLGPEAV TNKLEAIINS
HRPAVRYRVT VPTIVFAWLK RFLPSRWLDF LLIKAGGDGK R
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