| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0887 |
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| Symbol | |
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| ID | 3761358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 965218 |
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| End bp | 967443 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785607 |
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| Product | patatin |
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| Protein accession | YP_391157 |
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| Protein GI | 78485232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGATAC GACTGGCTGC TTATTTTTTG CTCCTCACCA GCACGAGTAG TTTAGCCAAT
ACCGAACACC CCTCTTCTGA AAAAAACTCA TCACGTCCCA AAATAGGTCT GGTCCTTCCA
GGCGGTGGCG CACATGGATT GGCTCACATC GGCGTGTTAA AGCAATTGGA AAAAGCCAAC
ATCCCCATTG ATTATATTTC CGGCTCCAGC ATGGGAGCCG TGATTGGTGG ACTTTATGCT
TCAGGATTGA GCATCAGCCA GATAGAAAAT TTTGTCACCC ATGTCAATTG GGATCAAACC
TTTACCGATG ATAACTCAAG ACATTTTCTT TCTTTTCGGC GAAAGTCAGA CCAATACAAT
TATTTTGCAA AAGGTGAATT TGGCTATGAC AACGGGCGCT TTAAATTACC CAATGGATTA
ATCCTTGGTC AACAACAAGC CACCCTACTT AAAGGCATGA CTCTCTCAAG CTGTAATATC
AACGATTTTG ACCAGCTACC GATTCCTTTT CGTGCTGTGG CAACCGATGT CAGAACAGGG
GAAGAAATTG TTTTAAAATC GGGCGACCTG TCACAAGCCC TCAGGGCGAG CATGGCGGTT
CCAGGCATAT TCGCTCCCGT TTTAATCCAA GGACGCTACT TAGTGGATGG CGGCGTGACC
AACAACACCC CAATCAATGT AGTCAGAGAA ATGGGCGCCG ATATTGTCAT CGTATCGGAC
ATTCACACCG CCTATGACCC CAAAATGGAA ATGGACTCTT ACGTCAATAT TGGCGGCCAG
ATTCTCTCCA GTATGATTAC CGCTAACAGC TTGAGACAAT TAAAAACACT CGAACCACAG
GACATTTTAA TTCGACCTAC GATTCCAAAC ACAATCAGCC CAACCAACTT CAGTGATGCC
AAAAAAATCA TTAAGATTGG CTATCAAGCG TGCTTGAGCC AGCTAGAAGC GCTTAAAAAA
TTGGGGCATG CATCCTATTC TAAACCCGTT AGTCAGAACC CTCTACCGGT AATCGATGCC
ATTCAAATCC ATAACGAGAC CACTGTTTCA GATGAGCTTA TCCGTCAAGC AATCCAACAA
AAAACAGGCA TCCCAATTGA CCGTACGCAA CTGGAAACAG ACATTACCAA ACTGTATGGT
CTAGGCTTTT TTGAACTCGT GACCTATACC ATTGAACGTA TGGATGGAAA AAATGTCTTG
ATTATTCATA CACAAGCCCC ATCCTGGGGG CCTCATTTTT TTAAATTGAA ATTTAATTTA
GCGTCTAACC TAAATGACTC TAATTTGTTC AATCTTGGTC TACGCCACAC CTATGCTCCG
GCAAATAAAT TAGGAGGCGA GTGGCGCAAT AAAATAGAAA TCGGCCAAAC ACAGCTGTTG
AAAACTGCCT TTTACCAACC GTTATCGTAC AGTCAAAGGC CGTATATTGA GCCTTCACTT
CAGCTTAAAA AACGCATTTA CAGTTTAGGA ACGGAATCGA ACATCACATC CGTGCAACTT
GAACAACAAA CCATCTCCCC AAAACTGGAA CTGGGCTATA ACCTTTTCCA AAACTGGCGG
ACGTCAATGT CATATCAAAA TGAATTAGGA GATTTAATCT TAGGGAAGTA TGCCAGCTCA
CAAATAAAAG AGCACTACAA TGATCACATT GTGAGCTTGG CCTTGCAGCA TGACAGCTTA
GACCAAGTAA CGTTTCCACA ACGCGGAACC TTACTGAACC TGTCTTATCA CAATACACTT
GAAACTCTGG ATCAGGCCAG TAAAGTCATT GAATATAAAG GGCTGCTATC AAGCTATTAC
TCTTATGACC GCCATACATT CAACTTACAT GCTGAAGCAA CCACTATTGA GGCCAAAAAC
AAAGACGACA TCCATCGTTT CTATACACTA GGTGGGTTTC AACGACTCTC CGGCTATGCC
GAAGACGAAC TGATCGGCAA CCAGCTCCTC TTTGCTAAAC TAAAATACCT CTACCGATTC
TCTGCCAGCA GCAATGCGTT AGATTTTCCA TATTACGCTG GGGTCACTCT CGAAGCCGGT
AATGTTTATG ATAAAGACAC GTTTACCAAC GGAACAACAT CGGATGTCAG CTGGCAAAAC
ACCAAGCAAG CAGGAAGCAT TTTTTTCGGG ATGAACACTT TTATGGGCCC GGTTCACTTT
GCTTATGGGT ACCACAATGC CCAAAGACAA TCACTTTACC TCTACTTCGG TCATGCCTTT
AATTAA
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| Protein sequence | MLIRLAAYFL LLTSTSSLAN TEHPSSEKNS SRPKIGLVLP GGGAHGLAHI GVLKQLEKAN
IPIDYISGSS MGAVIGGLYA SGLSISQIEN FVTHVNWDQT FTDDNSRHFL SFRRKSDQYN
YFAKGEFGYD NGRFKLPNGL ILGQQQATLL KGMTLSSCNI NDFDQLPIPF RAVATDVRTG
EEIVLKSGDL SQALRASMAV PGIFAPVLIQ GRYLVDGGVT NNTPINVVRE MGADIVIVSD
IHTAYDPKME MDSYVNIGGQ ILSSMITANS LRQLKTLEPQ DILIRPTIPN TISPTNFSDA
KKIIKIGYQA CLSQLEALKK LGHASYSKPV SQNPLPVIDA IQIHNETTVS DELIRQAIQQ
KTGIPIDRTQ LETDITKLYG LGFFELVTYT IERMDGKNVL IIHTQAPSWG PHFFKLKFNL
ASNLNDSNLF NLGLRHTYAP ANKLGGEWRN KIEIGQTQLL KTAFYQPLSY SQRPYIEPSL
QLKKRIYSLG TESNITSVQL EQQTISPKLE LGYNLFQNWR TSMSYQNELG DLILGKYASS
QIKEHYNDHI VSLALQHDSL DQVTFPQRGT LLNLSYHNTL ETLDQASKVI EYKGLLSSYY
SYDRHTFNLH AEATTIEAKN KDDIHRFYTL GGFQRLSGYA EDELIGNQLL FAKLKYLYRF
SASSNALDFP YYAGVTLEAG NVYDKDTFTN GTTSDVSWQN TKQAGSIFFG MNTFMGPVHF
AYGYHNAQRQ SLYLYFGHAF N
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