Gene Tcr_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0874 
Symbol 
ID3760434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp953579 
End bp954094 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content41% 
IMG OID637785594 
Producthypothetical protein 
Protein accessionYP_391144 
Protein GI78485219 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.100983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATTT CACTTCGATA TACTCAAAGA ATTATTGTGT TACTCAGTGC TCTACTGTTT 
TCGAACCTTT CTTTTGCAGC CGCTTCAAAT ATCGTGACGG TTCAAAACAA GCAAGATATA
AAAGTTGTTT ACGATGTTAA TCAAAATAAC CTTGAAGCCG GCATTGGTAA AGGGTTGTAT
TATCTCCGAG GCCTGCTGGA AGCTTACCAG AAACAAGGCG TTTCGGAAAA ACAGCTTCAC
ATCAGTGTTG TGGTGCATGG TGCGGCCGGA TACTGGTTGT TAAAAGACAA ACCGTACCAA
GATTTTACCG GTAATCCTTT TGATGTGAAT GCAAACAAAA AGGTCGTACA GGAGCTGATC
GATCATGGTG TGAGCGTTGA ATTGTGTCAT GTAACGATGA AAGGTCACAG CTGGACCGCT
GAAGATGTTC TGCCAGGCGT GAAAATTGTG TTTGACGCCT ATACTCGAAT GATTGATTTG
CAACAGCAAG GCTATGCTTA CATCAAATTT ATCTAA
 
Protein sequence
MLISLRYTQR IIVLLSALLF SNLSFAAASN IVTVQNKQDI KVVYDVNQNN LEAGIGKGLY 
YLRGLLEAYQ KQGVSEKQLH ISVVVHGAAG YWLLKDKPYQ DFTGNPFDVN ANKKVVQELI
DHGVSVELCH VTMKGHSWTA EDVLPGVKIV FDAYTRMIDL QQQGYAYIKF I