Gene Tcr_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0817 
Symbol 
ID3762145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp889460 
End bp889816 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content38% 
IMG OID637785536 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 3 
Protein accessionYP_391087 
Protein GI78485162 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000805661 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGAAA ATTACTTACC TATCCTAGTA TTTGTAGTAC TTGGGATTCT TTTTGGAGTG 
GGGCCTATTT TGATGGGCTA CTTACTGGGT CCACAAAGAC CGGATGCTGA AAAATTGTCT
CCATATGAGT GTGGTTTTGA AGTATTTGAA GACTCCAGAA TGAAGTTCGA TGTGCGCTTT
TATTTAGTAG CAATTTTGTT CATTATTTTT GATTTAGAAA TTGCGTTTCT ATTTCCATGG
GCTGTTGCCT TAGAAGAAGT GGGCACATTT GGATTGCTGG CTATGGGTGT TTTTCTAACA
TTGTTAGTCG TCGGTTTTAT TTATGAGTGG AAAAAAGGAG CGCTGGAATG GGAATAG
 
Protein sequence
MLENYLPILV FVVLGILFGV GPILMGYLLG PQRPDAEKLS PYECGFEVFE DSRMKFDVRF 
YLVAILFIIF DLEIAFLFPW AVALEEVGTF GLLAMGVFLT LLVVGFIYEW KKGALEWE