Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0797 |
Symbol | |
ID | 3760411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 869968 |
End bp | 871041 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637785515 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_391067 |
Protein GI | 78485142 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000426941 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAG AAGTATTGAT TTTACCCGGA GACGGGATTG GACCGGAAAT TACAGCCGAA GCCGTTAAAG TTTTGGAAGC CCTGCAACAA AAAGATAATT TGGATATCAG CATGACACAC GATCTAGTCG GTGGCGCTGC TTATGACCAG CATGGTGTGC CTTTAGCAGA AGAAACGCTA GAGAAGGCCA AGCAATCTGA TGCCATTTTG TTAGGTGCGG TTGGCGGTTA TCAATGGGAA TCATTGGATA TTTCGGTGCG TCCTGAAAAA GGATTGCTGG CATTACGTTC TAATTTAGAG TTGTTCGCCA ATCTAAGACC GGCGTATTTG TTTCCGCAAT TGGCTGATGC GTCGACCTTG AAGCCTGAAG TGGTGGCTGG GTTGGATATT CTGATTGTTC GTGAATTAAC CGGGGGAATT TATTTTGGAC AGCCTCGTGG TATCCGTACA TTAGACAATG GAGAGCGCCA AGGATATAAC ACCTATGTTT ACTCAGAATC CGAAATCAAA CGTATCGCAC ATGTGGCTTT TGATGCGGCC ATGAAGCGTA ACAAAAAGCT GTGTTCTGTT GATAAGGCTA ATGTGCTGGA AGTGACGGAG ATGTGGCGTG AGATTGTGGA TGAGGTGGCC AAAGAATATC CAGAAGTAGA GGTTCAACAC ATGTATGTGG ATAACGCTGC GATGCAGTTG GTGCTTAACC CAAAACAATT TGACGTGATG GTGACCGGTA ATATGTTTGG TGACATCCTT TCTGATGAAG CGTCTATGTT GACCGGATCG ATTGGTATGT TGGCTTCGGC GTCTTTGGAT GCGAATAACA AAGGGATGTA TGAACCAAGT CATGGTTCAG CACCGGATAT TGCAGGGCAA AACATTGCGA ATCCGCTGGC GACAATTTTG TCTGCGGCCA TGATGTTACG TTACAGCTTG AACCGTGAAG ATTTGGCTTT GAAGATTGAA ACTGCTGTCA GTAAAGTGCT GGACCAAGGC TTAAGAACCG GGGATATTTG GTCAGAAGGA TTAACGAAGG TATCGACATC AGAAATGGGC GATGCGGTCG TCGCTGCACT GTAA
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Protein sequence | MTQEVLILPG DGIGPEITAE AVKVLEALQQ KDNLDISMTH DLVGGAAYDQ HGVPLAEETL EKAKQSDAIL LGAVGGYQWE SLDISVRPEK GLLALRSNLE LFANLRPAYL FPQLADASTL KPEVVAGLDI LIVRELTGGI YFGQPRGIRT LDNGERQGYN TYVYSESEIK RIAHVAFDAA MKRNKKLCSV DKANVLEVTE MWREIVDEVA KEYPEVEVQH MYVDNAAMQL VLNPKQFDVM VTGNMFGDIL SDEASMLTGS IGMLASASLD ANNKGMYEPS HGSAPDIAGQ NIANPLATIL SAAMMLRYSL NREDLALKIE TAVSKVLDQG LRTGDIWSEG LTKVSTSEMG DAVVAAL
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