| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0774 |
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| Symbol | |
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| ID | 3761698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 844944 |
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| End bp | 846713 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785492 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_391044 |
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| Protein GI | 78485119 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC AAGCGTTAAG TCGAATTAAG GAAAGACTCC ATTATTGCTA TGGCGCAGAC
GATGCTGAGG TCGCCTATCA AGAAATTTGT GACTTATTGC AGTCATTCTC TTCTGAACAA
ACGCTTCCCG AATCGCGTTG GTCGCATGAA GATGTCATGC TGATTACCTA TGGTGACACC
TTTCAAAAAG AAGGTGAGGT ACCGCTTGAG ACGTTATCCC GCTTTTTGAA AACGCATATC
AAGGATGCGA TCAATAACGT CCATATTTTG CCGTTTTTTC CTTACAGTTC GGACGATGGG
TTTTCCGTCA TTGATTACAC CCTGGTCAAT CCGGATTTGG GAGATTGGTC ACAGGTCGAA
GCGATTGGTG AGTCTTATCA ATTAATGTTT GATCTGGTGG TAAACCATAT TTCTCGGGAG
AGTCTTTGGT TTACCGATTT TAAAGCCAAT ATTCCACCGT TCAACGAGTT CTTTATTGCC
ATGGAAGGTA CCGAAGATGT GTCTCAGGTG ACGCGACCAC GAAACACGCC TTTGTTAGTG
CCTGCCTACA CGCATCGTGG CCGAAAAATG GTGTGGGCGA CATTCAGTGC CGACCAGATT
GATTTGAACT TTAAGAACCC AAAAGTCCTG ATTAAGATGC TGGAAGTTTT GCTGTTGTAT
CTGGAAAAAG GGGCGAAAAC GATTCGCCTA GATGCGATTG CGTTTTTGTG GAAGGAGTTA
GGCAGCAAGT GTATTCATTT GCCTGAGACG CACCAGATGG TGAAGTTATT CCGAGATGTG
ATGTCCATTG TCAAACCTGA AAGCATTTTG CTGACGGAAA CCAATGTGCC GCATCTGGAA
AATTTATCTT ATTTCGGACA GCAGGACGAA GCACACATGG TGTATCAATT TGCGTTGGCA
CCGTTGGTGT TGCATGCATT GCATCGTGGG GATGGAAGTT ATTTAACCGA GTGGGCCAGT
ACCTTAGATG CGCCGCCAAA AGGCTGTACC TTTTTAAACT TTACCGCGTC ACATGATGGG
ATTGGGGTTC GACCCGTTGA GGGCATTCTG CCGGAACGAG AAGTGGAAGA TTTGATTACC
AGTATGCACC GTCTGGGTGG GTTTGTGACA ACCAAATCCA ACCCGGATGG CACAGAATCG
CCTTATGAAA TCAATATCGC GTTATTCAGT GCATTTCGTG AAACATATCA TTCCAATGGT
CCGGATCAAT GGCAGGTGGA TCGTTTTATT TGTTCACAAA ATATCATGAT GACGTTGCAG
GGCATTCCGG CTTTTTATAT TCACAGTTTG GTGGCCGCTC CGAATGACCG TGAAGGGGTT
GAGAAAACGG GAAGAACACG TTCTATTAAC CGTCGTCGCT GGGATTATGA TTATTTACAG
GCCTTGATTG AAAGCGGCCG AACTTCGAAT GCGGAAGTGT TGAAACGGTT GACCAATATT
TTGCAACGCC GTAAAAAGCA CAAAGCGTTT CACCCGGATG TTCCGCAACA TGTGATTGAT
TTGGGGCAAT CGTTTTTCGC GTTATGGCGT GATGAAGAGG GATTACGATT TCCATTGTTG
GCCATTCATA ACTTAACCAG TGAAATTAAG CTCATCGATT TGTCTAAAAT AGCCGGTATT
GAGCGCTTCT CGTATTGGGT GAATTTATTG GATAATCGAG GCGTTTCCAG TGCGGAAAAC
AACTTTGTGT TGCAACCCTA TCAATCGGTT TGGTTGATGC CGGAAACCGT GGATGACGTG
TCTGCCCTTT GGGCACCGTT TACAGATTGA
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| Protein sequence | MKEQALSRIK ERLHYCYGAD DAEVAYQEIC DLLQSFSSEQ TLPESRWSHE DVMLITYGDT
FQKEGEVPLE TLSRFLKTHI KDAINNVHIL PFFPYSSDDG FSVIDYTLVN PDLGDWSQVE
AIGESYQLMF DLVVNHISRE SLWFTDFKAN IPPFNEFFIA MEGTEDVSQV TRPRNTPLLV
PAYTHRGRKM VWATFSADQI DLNFKNPKVL IKMLEVLLLY LEKGAKTIRL DAIAFLWKEL
GSKCIHLPET HQMVKLFRDV MSIVKPESIL LTETNVPHLE NLSYFGQQDE AHMVYQFALA
PLVLHALHRG DGSYLTEWAS TLDAPPKGCT FLNFTASHDG IGVRPVEGIL PEREVEDLIT
SMHRLGGFVT TKSNPDGTES PYEINIALFS AFRETYHSNG PDQWQVDRFI CSQNIMMTLQ
GIPAFYIHSL VAAPNDREGV EKTGRTRSIN RRRWDYDYLQ ALIESGRTSN AEVLKRLTNI
LQRRKKHKAF HPDVPQHVID LGQSFFALWR DEEGLRFPLL AIHNLTSEIK LIDLSKIAGI
ERFSYWVNLL DNRGVSSAEN NFVLQPYQSV WLMPETVDDV SALWAPFTD
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