Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0765 |
Symbol | |
ID | 3761890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 835305 |
End bp | 835958 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785481 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_391035 |
Protein GI | 78485110 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0575497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATTGA AAGCACCCAT CAAAAAAATT ATGTCAGGTT TGGTTATGGT TTGCGTACTC GCTTCACCTG TACTGTCGTC TGCCAGTGAC CGAGCGAAAC TGTCTGATTT GAATGCATTT GTCGCGAATT TAAATACCTT TAGTGCCAAG TTCGAACAAA CTCAGCCGGA CGAAAGTTTG TTTGCCATGA ACCGCTCAAC GGGCTATTTT TCCATGAAAC GTCCGGGGCA ATTGCTTTGG GTCTATGAAA AACCAGAGCC TCAGAAAATC ATTTCGGATG GTCGTAATGT CTGGGTCTAT GATGTCGATT TGGATCAGGC GACGGTACGA GCCTTGGCCA ATGTGGAAGC CGATTTTCCG TTAAGCTGGT TGCTTTACAA AGAACCCTTA TCCGAACGAT TCAATATTAT TCCCGGTTCC ATTAAGGATG GCGTGAGTTG GTATAATTTA ACCCCGAAAG AAGGCACCTT TTTCCAAAGT TTGGAAGTGG CCATTGCCGA TGGCAAAATG GTGCAGATCT GGATGTATCA AAACGCGGAT AATGTCACCA AAGTGGTGTT TAACGATATC AGACAAAACC AGCCTGTTCG CGATCAACAA TTCGACTTCC AACCACCGAA GGGGGTGGAT GTGATTGGTC AAGCTTTGCC TTAG
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Protein sequence | MLLKAPIKKI MSGLVMVCVL ASPVLSSASD RAKLSDLNAF VANLNTFSAK FEQTQPDESL FAMNRSTGYF SMKRPGQLLW VYEKPEPQKI ISDGRNVWVY DVDLDQATVR ALANVEADFP LSWLLYKEPL SERFNIIPGS IKDGVSWYNL TPKEGTFFQS LEVAIADGKM VQIWMYQNAD NVTKVVFNDI RQNQPVRDQQ FDFQPPKGVD VIGQALP
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