Gene Tcr_0750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0750 
Symbol 
ID3760893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp820777 
End bp822729 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content45% 
IMG OID637785466 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_391020 
Protein GI78485095 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGAGG AAATTTTACA GGATTTTTTA GTCGAGGCGT CAGAGCTGGT TGAACAGCTT 
GATGAACAGC TTGTTGAACT AGAAAACTCC CCATCGGATT CGGATTTATT GAATGCCATT
TTCAGAGGGT TCCACACGAT TAAAGGGGGC GCTGGCTTTT TAGGCGTCAC CCCGTTAATT
GAAGTGTGTC ACCGTGCTGA AAATGTGTTC GATAAAATTC GAAACGGTGA TGTTGAGTAT
GATTCAACAG CCGCAGATGT CATTATGCGT GCTTTTGATG TTATTACCGA TTATATTCAA
CAACTTAACG ATGGTGCCCG TGAACTGGAA GAAGCTGATG AAGGCTTGTT GTCTGAATTA
GATGCGTTAT GGAAAGGGGG GGCGACTCCT CAACCTGCTT CTGAACCCGC TCAAGAAGAA
ATGACCTCTC ACCCTAAGTT AGAGTTGCCA GAAGGCGTTG ACCCGGATGG TGAAATTTCA
GATGATGAAT TTGAAGCGCT GTTAAATCAG CGTGATGCAT TAAGCGGCTC TGATTCCAGC
GAATCAGAAA CAGAAGAAGT AAAATTAGCT TTGCCGGATG ATGTGGATCC AGACGGTGAT
ATTACCGATG ATGAATTTGA AGCTCTTTTA AATCAAAGAG ATATGCTGGA AGGAATTCAA
GAGCCACAGG AAACGGTTTC AGCAACACCG CCGCCCGCAC CAGAAACTGT CAAGCCAACG
CCGCCGCCCG CGCCTAAAAA AGAATCAAAA CCTGAGACCC CTAAGCCAGA AGCCTCTAAA
GCGGCTACGG CAGAGTCGAC CGTACGAGTC GATACTCGAC GACTCGATGA AATTATGAAT
TTAGTCGGGG AGCTGGTTCT TGTCCGAAAT CGTTTACTGA CCTTAAGATC GAGTGATGGT
CCTGAAGAGG CATTGTCAAA TGCGGTTGGC AATCTGGATC ATGTGACAAC AGATCTGCAA
GCATCGGTGA TGAAAACCCG TATGCAACCT GTTAAAAAAG TGTTTGGGCG CTTCCCTCGA
GTGGTTCGAG ATCTGGCCCG TAAACTAGGG AAAGAAATTG AACTGGAATT GAAGGGCGAA
GAAACCGATC TGGATAAGAA TTTAGTGGAA GCGTTAGCGG ATCCTCTCGT GCATTTGGTT
CGAAACTCGG TTGACCATGG GGTTGAAATG CCAGATGTTC GTGAACAAGC TGGCAAGCCT
CGTAAAGGGA CAGTCATTTT AGCAGCGGAA CAAGAGGGCG ATCATATTCT GTTGTCGATT
ACCGATGACG GTAAAGGTAT GGATCCAGAT GTTCTACGCC GTAAAGCCGT TGAAAAAGGC
ATGATGGATG AAGTCTCTGC AAATCAATTA GATGATAAAG CTGCTTTTGA ATTAATCATG
TCCGCAGGGT TTTCAACCGC CGACCAAATC AGTGATATTT CCGGACGAGG AGTCGGGATG
GATGTGGTTA AAAGCATGAT CACGAAACTG AACGGCAGTA TTGATATTAA TTCTGTTTTA
GGGGAAGGGA CACAAATTAA AATACGTGTG CCTTTAACTC TGGCGATATT ACCGACACTA
ATGGTCTCTT TTGAAGACGA TAGCTATGCG ATTCCTTTGA CCAGCGTGCA AGAAATATTT
GATTATGATG CCTCTCAAAT CAACCGAATT GATGGTCAAA TGATGGTTCG CTTAAGAGAA
AAAAGTATTC CATTATTGTT TTTATCGGAT TGGTTGGCGC CTGATCAGGT AAAAGAAAAT
TATGAAGGCG ATAAAGTCAT TATTGTTTCG ATCGGGAACC AAAGAGCCGG TTTGGTGGTT
GAACAGGTCA ATGGACAGGA AGAAGTTGTG ATTAAACCGT TAGGCGTGAT GATGAAGCAT
TTAGAAGGGT ATGCAGGTGC GACCATTACC GGTAACGGAA ACATTGCCTT GATCTTAGAT
TTACCGGGCG TGATTCAACG CTTTCAATAT TAA
 
Protein sequence
MDEEILQDFL VEASELVEQL DEQLVELENS PSDSDLLNAI FRGFHTIKGG AGFLGVTPLI 
EVCHRAENVF DKIRNGDVEY DSTAADVIMR AFDVITDYIQ QLNDGARELE EADEGLLSEL
DALWKGGATP QPASEPAQEE MTSHPKLELP EGVDPDGEIS DDEFEALLNQ RDALSGSDSS
ESETEEVKLA LPDDVDPDGD ITDDEFEALL NQRDMLEGIQ EPQETVSATP PPAPETVKPT
PPPAPKKESK PETPKPEASK AATAESTVRV DTRRLDEIMN LVGELVLVRN RLLTLRSSDG
PEEALSNAVG NLDHVTTDLQ ASVMKTRMQP VKKVFGRFPR VVRDLARKLG KEIELELKGE
ETDLDKNLVE ALADPLVHLV RNSVDHGVEM PDVREQAGKP RKGTVILAAE QEGDHILLSI
TDDGKGMDPD VLRRKAVEKG MMDEVSANQL DDKAAFELIM SAGFSTADQI SDISGRGVGM
DVVKSMITKL NGSIDINSVL GEGTQIKIRV PLTLAILPTL MVSFEDDSYA IPLTSVQEIF
DYDASQINRI DGQMMVRLRE KSIPLLFLSD WLAPDQVKEN YEGDKVIIVS IGNQRAGLVV
EQVNGQEEVV IKPLGVMMKH LEGYAGATIT GNGNIALILD LPGVIQRFQY