Gene Tcr_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0734 
Symbol 
ID3762109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp807390 
End bp808091 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content42% 
IMG OID637785450 
Productribonuclease III 
Protein accessionYP_391004 
Protein GI78485079 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0114504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA TGGAAAAACA GGCTAAGCTT AATCGGCTTT CTAAATCATT AGGTTACCAA 
TACAAAAACA TTGAGTTTTT GCAAAGAGCG TTGACGCATC GAAGCATGGG AGCCAAGAAT 
AATGAGCGAT TAGAGTTTCT AGGAGACAGC CTGGTTAACT TTATGATTGC AGATGCGTTG 
TTTCATCAGT TTCATAAAAT CTCTGAAGGG GATTTAAGTC GAATCCGAGC CTTTTTAGTT 
AAAGGGGAGA CGTTGGCTAA AATCGGTAAA GAATATCAAC TGTCTGATTA TTTGATGCTG 
GGTCCTGGTG AACTGAAAAG CGGTGGTTAT CGTCGCGAAT CGATTATTGC CGATACGGTT 
GAAGCGATTA TTGCTTCCGT TTACGAAGAT GGTGGATTAG ATGCTTGTCG CGCGTTTGTG 
ATGCGTCTTT ATGAAAACCG ATTGAAAGAG TTGGATCCTT CCAAAATTGG AAAAGATCCA 
AAAACACGCT TACAGGAATT TTTACAGTCT AATCGTGAAC AATTGCCTGA GTACAGTGTG 
ATGACAGTCA ATGGGCCTGC ACATGCGCAA GAGTTCACGG TCTCGTGTTA TGTGGCAAAA 
TTAAATAGAA AATTTGAAGC CACCGCGACA AATCGCCGAA AAGCCGAACA AGTAGCGGCG 
CAAGAAGCCT TAGATATTTT GGAGAACGAC GATAATGACT GA
 
Protein sequence
MSEMEKQAKL NRLSKSLGYQ YKNIEFLQRA LTHRSMGAKN NERLEFLGDS LVNFMIADAL 
FHQFHKISEG DLSRIRAFLV KGETLAKIGK EYQLSDYLML GPGELKSGGY RRESIIADTV 
EAIIASVYED GGLDACRAFV MRLYENRLKE LDPSKIGKDP KTRLQEFLQS NREQLPEYSV 
MTVNGPAHAQ EFTVSCYVAK LNRKFEATAT NRRKAEQVAA QEALDILEND DND