Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0722 |
Symbol | |
ID | 3760405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 791525 |
End bp | 793804 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637785435 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_390992 |
Protein GI | 78485067 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000328227 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCGAT TAAAACATGT GATGTTACTT TGGGTGTTTT TAGCGACGCT ATTTGGTGTG GTTGCGTTTT ATGTTTTTGA TGAAGCGAAC TTGGCCGAAA AAGCTTGGAT TTTGGGCATA GTTCCAATAC TGGTCTGGGT GGTCTGGGAC ATCATTAAAA GTCTACGCCA TAAAAATCTG GGGGTGGATC TTATCGCGGC ACTGGCCATA GCGAGTGCAC TTCTGTTGAA TGAGTATCTT GCGGCAGCTG TCATCACGCT TATGTATGCC AGTGGGCAGT CTCTGGAACA GTATGCCGCC AATCGTGCCA AACGGGAATT GACCGCATTA CTCAGCCGGG TGCCTACCGT AGCAGATCGC TATGCGAACG GAACCCTTGA AAGAGTTGCG GTTGCAGAGC TTCAACCCGG AGATCGATTG GTGATTAAAA CCGGCGCGGT GCTTCCGGTT GATGGTTATG TTTGCGGCAG CACGGCCACT CTGGATGAGT CTTCTCTGAC AGGGGAGTCA CTCCCTGTGA CACGTACTGA TGGGCAAGCA GCCAGCAGTG GAACCCTGAA TGTGGGTCAA CCGTTTGATT TGGTTGCGGT TCATGATGCC GCTGGCAGTA CCTATGCGGG GATTGTTCAC CTGGTAGAGG AGGCTCAAAA AGGGAAAGCC CCTTTTACTC GTATGGCGGA CCGCTATGCA TTGTGGTTTA TCCCTTTGAC GTTATTGGTG GCTGGCGCGG CGTGGTTGTT GTCAGGTGAT CCCATAAGGG CACTCGCCGT TTTGGTGGTG GCAACCCCTT GTCCACTTAT TCTAGCGGCT CCAATTGCGA TGGTTTCAGG CATCTCCGCC TCCGCTCGAC AAGGTTTATT GATTAAAAAT GGCGCCGCAT TGGAAGCTTT GGCTAACAGT GAACGTATCA TTTTAGATAA AACCGGAACG TTAACGACGG GCAATCCAAG GCTGATCGAT ATAGAAACCG ATGGCCGCTT AAGTCATGAA CAAATTCTTC AGTTGGCCGC GTCTCTTGAA CAAGCCTCTT TTCACGTGGT TTCAAACGCG ATTGTCGAAT CTTCTAAACA ACGAAACCTG TCTCTATTAA TACCAAAACA GGTTAAAGAT GTTGCCGGAA AAGGGGTGCA AGGGGTGTTA AATGACCAGC AGGTCATGAT TGGTCAACCT TCATGGGTTT TAGGCTCAAA CCAGACATCA ACACCGGATT GGGTGGCTTC TTTGCTGAAG CGTTCCAGTC ATAATGGTCA AATGTTGCTG CTTGTGTCTG TAGATCACCA GGTACGAGGT GCGCTGATTT TGCAAGACGA AATCCGGACC GATACCCCAC GAGCTTTAAG AAGTTTACGT GCCTTTGGTA TTCAAAGTCT TTCGATGGCC AGTGGTGATC AACCTGATAT TGCAAACAGT ATTGGCCATG CGCTTGGTAT GGATCACGTT TATGCAGGGC TTCACCCGGA CGATAAAGTA AAGGTTGTCC GTCAGGAGCG ACAACAAGGT ATCACAATGA TGGTCGGAGA TGGCGTTAAT GATGCGCCAG CATTGGCCAT TGCGGATATT GGGGTTGCAA TGGGAGCTGG GGGCGCGGGT GCAAGTTCAG AGGCCGCTGA CGCCGTGTTA ATGGTAGAAC GGGTGGATGT CTTAGCCGAT GGGTTACGAA TTGCTCGACG CAGTCAGGCG ATTGCGAAAC AAAGCATGGT GGTGGGCATG AGCTTATCCA TTATCGCTAT GTTGTTTGCC GCACTTGGAT ACCTTACGCC ATTGGTTGGG GCGTTGTTGC AGGAAGGGAT TGATGTATTG GTGATTATTA ATGCACTTCG AGCGTTGCGT CTTCCCGTGG GGCATGACAA AATTCTGAAT GTTGAACAGC AAGAAAAGCT GCAAAAAGAG CATGCTGATT TACAGTCTAC GTTAGACCAA ATCCGTCAAC TGGCAGATCG TTTAGCCAGC CAACAAAACG TCACCACTGA AGAAATGACC GAGCTGGCAC GATTGATTGA ACAAAAGCTG ATACCGCATG AGCAAATAGA TGAGCGACAG TTGCATCCTA AATTAGCCCA TAAAATGGCG GGCAATGATC CCATGGCTAT GTTAAGTCGG ACCCATAGTG AGATTTTGCA GCTTTGTAAT CAATATTTGT TACTGGTGAA TCAACCGCAG AATGAGCCGC AACGCAATGC TATGATTGGT GTGCTTTATA GTTTGAGTGC TATTTTAAAA CTGCATTTTG CTCAAGAAAA TGAGTTGTAC TCTTTATTGG CCAGTAATCG ACAGGCTTAG
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Protein sequence | MHRLKHVMLL WVFLATLFGV VAFYVFDEAN LAEKAWILGI VPILVWVVWD IIKSLRHKNL GVDLIAALAI ASALLLNEYL AAAVITLMYA SGQSLEQYAA NRAKRELTAL LSRVPTVADR YANGTLERVA VAELQPGDRL VIKTGAVLPV DGYVCGSTAT LDESSLTGES LPVTRTDGQA ASSGTLNVGQ PFDLVAVHDA AGSTYAGIVH LVEEAQKGKA PFTRMADRYA LWFIPLTLLV AGAAWLLSGD PIRALAVLVV ATPCPLILAA PIAMVSGISA SARQGLLIKN GAALEALANS ERIILDKTGT LTTGNPRLID IETDGRLSHE QILQLAASLE QASFHVVSNA IVESSKQRNL SLLIPKQVKD VAGKGVQGVL NDQQVMIGQP SWVLGSNQTS TPDWVASLLK RSSHNGQMLL LVSVDHQVRG ALILQDEIRT DTPRALRSLR AFGIQSLSMA SGDQPDIANS IGHALGMDHV YAGLHPDDKV KVVRQERQQG ITMMVGDGVN DAPALAIADI GVAMGAGGAG ASSEAADAVL MVERVDVLAD GLRIARRSQA IAKQSMVVGM SLSIIAMLFA ALGYLTPLVG ALLQEGIDVL VIINALRALR LPVGHDKILN VEQQEKLQKE HADLQSTLDQ IRQLADRLAS QQNVTTEEMT ELARLIEQKL IPHEQIDERQ LHPKLAHKMA GNDPMAMLSR THSEILQLCN QYLLLVNQPQ NEPQRNAMIG VLYSLSAILK LHFAQENELY SLLASNRQA
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