Gene Tcr_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0714 
Symbol 
ID3760397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp782441 
End bp783679 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content48% 
IMG OID637785427 
ProductBeta-ketoacyl synthase 
Protein accessionYP_390984 
Protein GI78485059 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.29984e-09 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGC GTCGTGTTGT CATGACGGGT GTCGGGTGTG TGACACCTCT TGGAAATACT 
GTAGAAGAAA CCTGGTCTGG TTTGTTAAAA GGGCAAAGCG GGATCGACTT CTTAACGACT
TTTGATACTG AAAACTTTGC CGTTAAATTT GGTGGTGAGA TTAAAGGGTT TGATATTACC
GAGTACATAA TGGCCAAAGA AGCCAAGAAA ATGGACCCTT TTATTCACTA CGGTTTGGCC
GCAGGAACAC AAGCTCTCAA AGACTCCGGT TTGGAAGTGA CGGATGACAA TGCGTGTCGA
ATTGGTGTGT CCATTGGTTC GGGTATTGGT GGTATTGGAT CGATTGAAAA ACAGCACGGC
ATTATGGACA AATCAGGTCC TCGTCGTGTT TCTCCTTTTT TTGTTCCAAG CTCCATTATT
AATATGGTTT CGGGTAATCT GTCGATTATG CATGGTTTAA AAGGGCCGAA TATGGCGATT
GGAACCGCTT GTGCAACCGG AACTCACAGT ATTGGGGATG CCTATCGAAT GATTCAGTTT
GGTGATGCCG ATGTGATGAT TGCAGGCGGT GCTGAGCATG CAACGACTCA ACTTGGTGTG
GCCGGGTTTG CGGCCGCTAA AGCGTTGTCC ACTCGTAATG ATGATCCGAA AGCTGCGAGT
CGTCCTTGGG ATCAGGGCCG CGATGGTTTT GTGCTGAGTG ATGGAGCGGG GGCGGTTGTA
TTGGAAGAGT ATGAGCATGC AAAAGCCCGT GGTGCAGAAA TTTATTGTGA AATTGTTGGG
TTTGGTATGA GTGGGGATGC GTACCACATG ACAAAACCAG CAGACGGTGG AGAAGGCGGA
GCACGTTGTG TGACAAATGC ACTCAACAAT GCAGGCATTA CCCCAGACCA GGTGGATTAT
ATTAATGCGC ATGGAACCTC AACACCGGCA GGGGATGTTT GCGAAGCCAG TGCCATTAAA
TCGGTATTTG GTGAACATGC CCATCGTTTA GCCGTCAGTT CAACCAAATC GATGACAGGG
CACGCCCTGG GTGCCGCAGG CGCTATGGAA GCGGTCTTTA CCGCGTTAGC TATTAAAGAG
CAAGTCTTAC CACCTACAAT CAACTTAGAA ACACCTGCGG AAGGCTGTGA CTTGGATTTT
GTGCCTGGTG AAGCACGACA GGCTAAAGTG ACCTACGCTG TTTCTAACTC GCTAGGGTTC
GGTGGGACAA ATGCATCACT TGTCTTTGGA AAGGTTTGA
 
Protein sequence
MKMRRVVMTG VGCVTPLGNT VEETWSGLLK GQSGIDFLTT FDTENFAVKF GGEIKGFDIT 
EYIMAKEAKK MDPFIHYGLA AGTQALKDSG LEVTDDNACR IGVSIGSGIG GIGSIEKQHG
IMDKSGPRRV SPFFVPSSII NMVSGNLSIM HGLKGPNMAI GTACATGTHS IGDAYRMIQF
GDADVMIAGG AEHATTQLGV AGFAAAKALS TRNDDPKAAS RPWDQGRDGF VLSDGAGAVV
LEEYEHAKAR GAEIYCEIVG FGMSGDAYHM TKPADGGEGG ARCVTNALNN AGITPDQVDY
INAHGTSTPA GDVCEASAIK SVFGEHAHRL AVSSTKSMTG HALGAAGAME AVFTALAIKE
QVLPPTINLE TPAEGCDLDF VPGEARQAKV TYAVSNSLGF GGTNASLVFG KV