Gene Tcr_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0707 
Symbol 
ID3760390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp777161 
End bp777703 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content38% 
IMG OID637785420 
Producthypothetical protein 
Protein accessionYP_390977 
Protein GI78485052 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.041241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCCA TGTTTGATAA GCTTCCAGAT TTGATTGATC CTGTTTACTC TGCGCAACAT 
AATAAACAAT TTGTTGCTAG AGTCAATCAA GCGCGTTTTC CGCGTCTTAA AGAGCAGTTA
ATTTCTGCCG AAAATGATGT GGAAGTGAAT GTGCAATTTT ATTATCACAA ACAGTTTAAG
ATGCATGCGT TTGATTTGCA GCTGAAAACG GTTTTTGTAT TGGAATGTCA GCGTTCATTA
AAGCCTTTTG ATTACCCTGT GGCGTCATCA GTCACAGGGG TGTTTGTTGA ATCAGCGGCT
TTGGCAGAAG ATTTGCCTTC TGAAGTTGAA GTGTATGAGC TTTCAGAGGA AAAGATTTCG
TTGATTGAAT TGATTGAAGA TGAATTGCTT CTAAATATTC CTTTAGCCGC CATTAATGAT
CAATCTGAAA TGGCGTATGA CAATCAACTG GAAGATGAAA AGACTTCTTT GGAAGTCGAT
GAATTAGAAA AGAAAGAAAA TCCTTTTGCA GTGTTGCAGG GATTAAAAAA TAACCCGAAT
TAA
 
Protein sequence
MRAMFDKLPD LIDPVYSAQH NKQFVARVNQ ARFPRLKEQL ISAENDVEVN VQFYYHKQFK 
MHAFDLQLKT VFVLECQRSL KPFDYPVASS VTGVFVESAA LAEDLPSEVE VYELSEEKIS
LIELIEDELL LNIPLAAIND QSEMAYDNQL EDEKTSLEVD ELEKKENPFA VLQGLKNNPN