Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0707 |
Symbol | |
ID | 3760390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 777161 |
End bp | 777703 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637785420 |
Product | hypothetical protein |
Protein accession | YP_390977 |
Protein GI | 78485052 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.041241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCA TGTTTGATAA GCTTCCAGAT TTGATTGATC CTGTTTACTC TGCGCAACAT AATAAACAAT TTGTTGCTAG AGTCAATCAA GCGCGTTTTC CGCGTCTTAA AGAGCAGTTA ATTTCTGCCG AAAATGATGT GGAAGTGAAT GTGCAATTTT ATTATCACAA ACAGTTTAAG ATGCATGCGT TTGATTTGCA GCTGAAAACG GTTTTTGTAT TGGAATGTCA GCGTTCATTA AAGCCTTTTG ATTACCCTGT GGCGTCATCA GTCACAGGGG TGTTTGTTGA ATCAGCGGCT TTGGCAGAAG ATTTGCCTTC TGAAGTTGAA GTGTATGAGC TTTCAGAGGA AAAGATTTCG TTGATTGAAT TGATTGAAGA TGAATTGCTT CTAAATATTC CTTTAGCCGC CATTAATGAT CAATCTGAAA TGGCGTATGA CAATCAACTG GAAGATGAAA AGACTTCTTT GGAAGTCGAT GAATTAGAAA AGAAAGAAAA TCCTTTTGCA GTGTTGCAGG GATTAAAAAA TAACCCGAAT TAA
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Protein sequence | MRAMFDKLPD LIDPVYSAQH NKQFVARVNQ ARFPRLKEQL ISAENDVEVN VQFYYHKQFK MHAFDLQLKT VFVLECQRSL KPFDYPVASS VTGVFVESAA LAEDLPSEVE VYELSEEKIS LIELIEDELL LNIPLAAIND QSEMAYDNQL EDEKTSLEVD ELEKKENPFA VLQGLKNNPN
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