Gene Tcr_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0646 
Symbol 
ID3760485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp723935 
End bp725377 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content43% 
IMG OID637785359 
Producthypothetical protein 
Protein accessionYP_390916 
Protein GI78484991 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.932654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCA TTCAGTTACT TTCTTCTCCT CTGACATGGC TGGTAATGGC GCTGATTGGC 
AGTATCGTAT GGGTTGTTCA ATTAAAGCAG GCATTGAGTT CGGCGAATGA AAAACTACCA
GGCCTGGCGG CAATAGAAGC GGATAATCAG TTTTTAAAAG AAGAGAATGA TCGTTTGAAA
TCAGAAATTT CTGATTTCCA AGTCATGAAA GGCGAATCGA ATCAGCGAGC GGAACAGTTG
GAGCAATTGA GAGCTTTGCA AAAAGAACAG CAGGTAACCT TCCAGCAACT GCAAACACGT
CATTCTGAAA CACAAGCCGA ATTGGCCAGT TTGAAAAGCC GTTTGGAAAC CGAGCGAGAA
AGTAATGCTG AAAAACTGGC GTTGTTGGAC TCAGCCAAAC AAACTTTGAC GCAAGAGTTT
AAGGTGTTAT CGAATGAAAT TTTAGAACAA AAGCAGCAGC AAATGGGGCA GCAGAGTAAA
GAAACCATCA GCGGTCTGGT GCAGCCTATC CAGACCTCTT TAGAGCAATT TAAACAGCGC
ATTGAAGCGG TGCATAAAGA AGATTTAGAG GGGCGGGCTT CTTTAACGGA ACAATTGAAA
CATCTAAAAG AGCTGAATCA GACCATGAGT CTGGAGGCGC AGAACTTGAC CAAAGCCTTA
AAAGGGGATC AGAAAATTCA GGGGAACTGG GGAGAATTCA TTCTTCGTAA ACTGCTGGAG
TCCACCGGGT TGCGGGAAGG AATTGAGTTT GAAACGGAAA AAAGTTTTAA CCAAGAAGGT
GGCAAGCGGT TGCGCCCTGA TGTGATTATC AATTTGCCGG ACAGTAAGCA TGTCATCATT
GATTCAAAAG TGTCATTAGT CAGTTATGAA GCCGCTTTGA ACAGCGAAAC AGAAAATGAA
AAGGCGCAGC ACATTAAAAA CCATCTTCAA AGCATCAGTA AACATATTCA AGCGTTATCT
GATAAGCGTT ATGATCATTT AGAATTGTTG AATGCACCGG ATTTTGTGTT GATGTTTATT
CCGATTGAAG GGGCGTATTT GATGGCGATT GAACAGAATT CAGCGATTTT TGAAAATGCC
TTTGACAAAA AGGTCGCGGT TGTCACACCG ACAACGTTAT TTACCACTTT GAAGACCATT
GAACAGCTTT GGCGCTATGA GCGTCAGTCC GAGCATACGG TTAAGTTGAT CAAGCGAGCC
GCCGAGGTGC ACGATAAATT TGTCGGTTTT ATTGATACGT TTGAAAAAAT CGGTAAACAG
CTTGGTACGG CACAGGGCTC TTTTGAGCAG GCGCGTAAAC AGATGTTGCA AGGCAATGGT
AATTTGGTGC GTCAGGCTGA AATGTTGAAA GAGTTAGCGG GTAAAACCAA AAAAGAAATT
CCGCAGCATT TGCTGGATGA AGCAGAAGGC GAGCGACTTC TGAATAAGGA ATCGGATGCC
TAA
 
Protein sequence
MDFIQLLSSP LTWLVMALIG SIVWVVQLKQ ALSSANEKLP GLAAIEADNQ FLKEENDRLK 
SEISDFQVMK GESNQRAEQL EQLRALQKEQ QVTFQQLQTR HSETQAELAS LKSRLETERE
SNAEKLALLD SAKQTLTQEF KVLSNEILEQ KQQQMGQQSK ETISGLVQPI QTSLEQFKQR
IEAVHKEDLE GRASLTEQLK HLKELNQTMS LEAQNLTKAL KGDQKIQGNW GEFILRKLLE
STGLREGIEF ETEKSFNQEG GKRLRPDVII NLPDSKHVII DSKVSLVSYE AALNSETENE
KAQHIKNHLQ SISKHIQALS DKRYDHLELL NAPDFVLMFI PIEGAYLMAI EQNSAIFENA
FDKKVAVVTP TTLFTTLKTI EQLWRYERQS EHTVKLIKRA AEVHDKFVGF IDTFEKIGKQ
LGTAQGSFEQ ARKQMLQGNG NLVRQAEMLK ELAGKTKKEI PQHLLDEAEG ERLLNKESDA