| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0641 |
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| Symbol | |
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| ID | 3760480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 718261 |
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| End bp | 719943 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785354 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_390911 |
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| Protein GI | 78484986 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGGTG AAGACCGTTT AGGGGAACAC CTTGTTCAAG AGGGACTGAT TTCTCAGGAT
CAACTTCGCA TCGCTTTGAT GGAACAAAAG ATTACCGGCA AAAAACTGGG AGAGATTCTG
ATTACGTTGG ATTTCTTAAC GGAAGAAGTG TCTCGTAAAG TGGTAGGAAG CGCCGTCGGT
TATTCCACCA TGTCGTTAAA AGGGGTTGTG CCCGACTTGA ATGCGCTTAG ACTCATTTCT
GAGTCATTTG CTCGAGCCAA TTTGGTCATG CCGATTAGTT TCGATGGCGA ACTTTTAAAA
GTCGGGATGA CCAGTCCAGA TGATATTTTA TTATTGGATA AGATCAAACG TCATATCAAA
CAAGATGTGC GTCTTGAGCC CGTGTTGGTT GTGGAAAACG AAATTCAATA TTCGATTGAT
CATTTTTATG GTTATGAATT GTCTATCGAC GGCATTCTTA GAGAACTTGA AACGGGCCAG
GCCGATGATT ATGTGCTCTC TGAGCAACAT GAATATTCTC AGCCCATGGT GCGTTTGGTT
GACAGTATTT TAACCGATGC GGTTAAAAGA GGCGCTTCGG ATGTTCATTT TGAACCCGAA
GAATATTATA TCCGAATCCG TTATCGTATT GATGGTGTGT TACAAGTGGT TCGCTTGCTG
CATAAATCAT TCTGGTCAGG TTTGGTGGTG CGTTTAAAGG TGATGTCTGA TTTAGATCTG
ACCGACCAGA GAATGCCACA GGATGGTCGA ATGGAATTGG TTGTGAATGG TCGTCAAATC
GACTTTCGTG TTTCATCGTT CCCAACTTCT CATGGTGAAA ACTTTGTACT CCGTATTTTG
GACCGAGAAA AGGGGATTAT GCCTCTGGAT GCGTTAGGGC TCGATGTAGA CAGTTATCGT
GAACTGAAGC TCATGATGTC GCGCCCAACG GGGATTGTTT TAGTAACAGG CCCTACCGGG
TCGGGTAAAA CCACCACGCT TTATTCGTTA TTAAATGAAA TTAATCAGGA AGGGGTCAAT
ATCATGACCC TGGAAGATCC GGTGGAATAC CCGATGAAGA TGATTCGTCA AACCGCTGTC
AATGAAGAAA TCGGAATGAC ATTCGCAACA GGTATTCGTT CGTTAATGAG ACAGGATCCG
GACATTGTTT TGATTGGTGA AATTAGGGAT AGTGAAACGG CCGAAATGGC GCTTAGAGCG
GCCATGACAG GTCATCAGGT CTTTACGACT TTGCATACGA ATTCGGCCAT AGGAGCGATT
CCTCGATTAC TGGATATCGG AATGTCACGT TCGATTTTGG CCGGGAATGT CATTGGAATT
TTGGCTCAGC GTTTGGCAAG GCGGCTATGC CCACACTGCA AAGAACCTTA TGAACCTGAT
GGATTTGAAA AGAGAATTGT CGGGTTTTCA GAGAATCAAT CCGCCACCTT GTATCGGGCA
GCGGGCTGTC CTATTTGTAA TGGTATTGGG TACAAAGGTC GTCTGGCGGT ATTGGAAATC
TTACGCTTTT CATCGGAAAT GGATGATTTG TTGTTAGAGG GAGCCTCGCA GCACGATATC
CTAGATCAAG CGGTTGAACA AGGGTTTACG GATTTGTTGC AAAATGCTTT AAGGTGGGTT
CGTTCAGGGG ATACCACCTT AGATGAGATC AGTCGGATCG TCGATTTGAC GGAACTGGTT
TAG
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| Protein sequence | MKGEDRLGEH LVQEGLISQD QLRIALMEQK ITGKKLGEIL ITLDFLTEEV SRKVVGSAVG
YSTMSLKGVV PDLNALRLIS ESFARANLVM PISFDGELLK VGMTSPDDIL LLDKIKRHIK
QDVRLEPVLV VENEIQYSID HFYGYELSID GILRELETGQ ADDYVLSEQH EYSQPMVRLV
DSILTDAVKR GASDVHFEPE EYYIRIRYRI DGVLQVVRLL HKSFWSGLVV RLKVMSDLDL
TDQRMPQDGR MELVVNGRQI DFRVSSFPTS HGENFVLRIL DREKGIMPLD ALGLDVDSYR
ELKLMMSRPT GIVLVTGPTG SGKTTTLYSL LNEINQEGVN IMTLEDPVEY PMKMIRQTAV
NEEIGMTFAT GIRSLMRQDP DIVLIGEIRD SETAEMALRA AMTGHQVFTT LHTNSAIGAI
PRLLDIGMSR SILAGNVIGI LAQRLARRLC PHCKEPYEPD GFEKRIVGFS ENQSATLYRA
AGCPICNGIG YKGRLAVLEI LRFSSEMDDL LLEGASQHDI LDQAVEQGFT DLLQNALRWV
RSGDTTLDEI SRIVDLTELV
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