Gene Tcr_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0622 
Symbol 
ID3760344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp695892 
End bp697172 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content44% 
IMG OID637785335 
Producthistidyl-tRNA synthetase 
Protein accessionYP_390892 
Protein GI78484967 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGC AAATCAATGC CATTCGCGGC ATGAATGATT TATATGGTGA TCAATCACAT 
GCATTTGATT ATCTTGTGCA AACGGCCGAA TCGGTATTAA AGCAATATGG CTTTCAATCC
ATTCGTCTTC CGATTGTCGA AAAAACAGAA TTGTTTGCAC GCTCTATTGG TGAAGTCACT
GATATCGTGG AAAAAGAAAT GTATACCTTT GAAGACCGTA ATGGCGATAG CTTGACGTTG
CGCCCTGAAG GAACGGCCGG ATGCGTACGA GCGGTTATCC AAAACGGTTT GGCGCACAAT
CAAATTCAAA AGTTGTATTA CACAGGACCA ATGTTTCGCC ATGAGCGTCC GCAAAAAGGC
CGTTATCGCC AATTCAATCA ATTTGGCGTT GAAGTGTTTG GTATTGAAAG TGTCGACATT
GATGCGGAAT TGATAGCCTT ATCCGCTCGT TTATGGGAAA GACTTGGATT GCAAAACCTA
GAGTTGCAAA TCAATTCATT AGGAAGTCAG GCAGCACGCC AAGCTTACCG TGACATTTTG
GTTGCCTATT TTGAAGAGCA TAAGTCACAG TTGGATGAAG ACAGCCTTCG ACGTTTAAGT
ACGAATCCAC TTCGTATTCT GGATACAAAA AATCCGGATA TGAAAGCATT GGTGGAGGCG
GCTCCTAAGT TAATGGATCA TTTGGATGAA GCGTCTAAAC AGCACTATGA AGAGTTGAAG
GCACATTTGG ATGATTTGGG CGTGGCTTAT GTGGAAAATC CAAACTTAGT ACGAGGATTA
GACTATTATA ATCGCACTGT ATTTGAGTGG GTCACCACGG AGTTGGGAGC CCAGGGAACT
GTCTGTGCCG GTGGGCGTTA CGATGGGTTG GTTGAGCAGA TTGGTGGTAA GCCAACCCCG
GCTGTCGGAT TTGCGATGGG CATTGAGCGT TTAATGGCTT TGTTAATGGA TAATGAGCTG
GTTCACGAAG AAAACGGGCC GGATGTTTAT ATGGTGTTGG CTGGAGACAG TACAAAACGC
CCAGGCCTGG TCATTTCTGA GCAGATTCGA GAGAATTTAC CGGACATTAA GGTTCAAATG
AATTGCGGAG GCGGGAGCTT TAAAAGCCAA TTTAAGAAGG CCGATAAATC CGGTGCACGC
ATTGCTTTGG TGTTAGGGGA AGATGAAGTG AATCAAAAGC AGATTGCCGT TAAATATTTA
AGAGAAGAGC GTGAGCAGGA AATGGTTCCT TGGGATCAGA TGGTTACTCT TCTAAAAACC
GCATTAACCG AATCAAAATA G
 
Protein sequence
MSKQINAIRG MNDLYGDQSH AFDYLVQTAE SVLKQYGFQS IRLPIVEKTE LFARSIGEVT 
DIVEKEMYTF EDRNGDSLTL RPEGTAGCVR AVIQNGLAHN QIQKLYYTGP MFRHERPQKG
RYRQFNQFGV EVFGIESVDI DAELIALSAR LWERLGLQNL ELQINSLGSQ AARQAYRDIL
VAYFEEHKSQ LDEDSLRRLS TNPLRILDTK NPDMKALVEA APKLMDHLDE ASKQHYEELK
AHLDDLGVAY VENPNLVRGL DYYNRTVFEW VTTELGAQGT VCAGGRYDGL VEQIGGKPTP
AVGFAMGIER LMALLMDNEL VHEENGPDVY MVLAGDSTKR PGLVISEQIR ENLPDIKVQM
NCGGGSFKSQ FKKADKSGAR IALVLGEDEV NQKQIAVKYL REEREQEMVP WDQMVTLLKT
ALTESK