Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0597 |
Symbol | |
ID | 3762461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 674002 |
End bp | 674625 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785310 |
Product | ribonuclease T |
Protein accession | YP_390867 |
Protein GI | 78484942 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0238382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TCACCCATAT CAAAGAACGA TTCCGCGGCT TTCTACCTGT TGTTGTCGAT GTTGAAACAG CAGGCTTTGA CCCTCAAACC AATGCACTAA TCGAAATTGC CATCGTGACA TTAAAAATGA ATTCAGATGG CACAATCGAA CGCGATCAGA CAGTTCAAGC AAACGTCCTT CCTTTTAAAG GATCACAACT GGATAAAAGT GCTCTGAAAT TCATCGGCGT GGAAGACCCA ACCCACCCTT TTAGAATGGC CGTTTCTGAA AAAGACGCAT TGGAAAAATG CTTCGCACCC ATCAGGCAGC TTCTCAAGGA AACCGACTGC AGTCGAGCTA TCCTTGTGGG GCATAATGCC TTTTTTGATT TAAGTTTTGT GAAAGCGGCG GCGGATCGCT GCAAAGTCAA ATCGCCTTTT CATGAATTCA GCACGTTTGA CACCGTCTCT CTTGCTGGAC TGGCTTATGG CCAAACCGTA CTTGCAAAAG CGGTGCAAAT GGCTGAAATT GAATGGGATA ATAGCAAAGC GCATTCGGCT GAGTATGACA CTATTAAAAC AGCCGATTTG TTCTGTAAAA TCGTCAATCA GTGGCCAATC GAAAAAACGA GAACACTGCT TTAA
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Protein sequence | MNKITHIKER FRGFLPVVVD VETAGFDPQT NALIEIAIVT LKMNSDGTIE RDQTVQANVL PFKGSQLDKS ALKFIGVEDP THPFRMAVSE KDALEKCFAP IRQLLKETDC SRAILVGHNA FFDLSFVKAA ADRCKVKSPF HEFSTFDTVS LAGLAYGQTV LAKAVQMAEI EWDNSKAHSA EYDTIKTADL FCKIVNQWPI EKTRTLL
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