Gene Tcr_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0588 
SymbollpxC 
ID3762413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp662901 
End bp663821 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content41% 
IMG OID637785301 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_390858 
Protein GI78484933 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00025612 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACAAA GAACTCTTGC CAATCCCATC AAAGCTAAAG GTGTTGGGCT CCATACCGGT 
CATAAATCGA TTATGACGTT GCGCCCAGCT CCCGTAAATA CCGGAATCGT ATTCCGTCGA
ATTGATCAAA CGCCTATCGT TGAATTTCCT GTTTCACCAG AATTGGTTAA AGAAACAATG
CTGTGTACGA CCATTGTGCA AGAGCAAGAT AATCAAAAAA TCAAAATTGC CACGATTGAA
CATTTGATGT CAGCTTTGGC TGGGGTTGGA ATTGATAATT TGTATATTGA TATTACTGCC
GATGAAGTTC CTATAATGGA CGGCAGCGCA TCACATTTTA TTTTTTTACT GCAATCTGCC
GGCATTCAGC TACAGGAAGC GTCGAAAAAA TTTATACGCA TCAAAAAACA AGTTAAGGTT
CAAAATGAAA AAGGCGGAGT GGCTGAGTTC AGTCCGTATG AAGGCTTTCG CTTGAATTTT
TCGATTGAGT TTGACCATCC TGCATTTGAT CAAACGGCTG AAAAAATGAC CCTTAGCTTT
TCTTCAACCG CATACTTTAA AGAAGTGAGT CGCGCTCGAA CATTTGGTTT TATGAAAGAC
ATGGAAAAGC TTAGAGCGCA GAACCTAGGT TTGGGGGCCG GCTTGCATAA TGCGATTGGA
CTCGATGAAA ATGGCGTTGT GAATCAGGAA GGGCTTAGGG ATAAAGATGA ATTTGTGCGT
CATAAGATTC TGGATGCTGT TGGGGATTTA TATATGGCAG GTCATCCTAT TATTGGTGAG
TTTACAGCAC ACAAATCAGG ACATGCTTTG AATAATCAGT TATTGAGAGC TTTAGTGGCC
GACCCTGAGG CGTATGAAGT CGTAACGTAT GATGATGAAG AGCCCCCCAT TCAGTATGGA
AGCAGTAAAA TTCTTGTGTA A
 
Protein sequence
MKQRTLANPI KAKGVGLHTG HKSIMTLRPA PVNTGIVFRR IDQTPIVEFP VSPELVKETM 
LCTTIVQEQD NQKIKIATIE HLMSALAGVG IDNLYIDITA DEVPIMDGSA SHFIFLLQSA
GIQLQEASKK FIRIKKQVKV QNEKGGVAEF SPYEGFRLNF SIEFDHPAFD QTAEKMTLSF
SSTAYFKEVS RARTFGFMKD MEKLRAQNLG LGAGLHNAIG LDENGVVNQE GLRDKDEFVR
HKILDAVGDL YMAGHPIIGE FTAHKSGHAL NNQLLRALVA DPEAYEVVTY DDEEPPIQYG
SSKILV