Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0588 |
Symbol | lpxC |
ID | 3762413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 662901 |
End bp | 663821 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637785301 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_390858 |
Protein GI | 78484933 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00025612 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAAA GAACTCTTGC CAATCCCATC AAAGCTAAAG GTGTTGGGCT CCATACCGGT CATAAATCGA TTATGACGTT GCGCCCAGCT CCCGTAAATA CCGGAATCGT ATTCCGTCGA ATTGATCAAA CGCCTATCGT TGAATTTCCT GTTTCACCAG AATTGGTTAA AGAAACAATG CTGTGTACGA CCATTGTGCA AGAGCAAGAT AATCAAAAAA TCAAAATTGC CACGATTGAA CATTTGATGT CAGCTTTGGC TGGGGTTGGA ATTGATAATT TGTATATTGA TATTACTGCC GATGAAGTTC CTATAATGGA CGGCAGCGCA TCACATTTTA TTTTTTTACT GCAATCTGCC GGCATTCAGC TACAGGAAGC GTCGAAAAAA TTTATACGCA TCAAAAAACA AGTTAAGGTT CAAAATGAAA AAGGCGGAGT GGCTGAGTTC AGTCCGTATG AAGGCTTTCG CTTGAATTTT TCGATTGAGT TTGACCATCC TGCATTTGAT CAAACGGCTG AAAAAATGAC CCTTAGCTTT TCTTCAACCG CATACTTTAA AGAAGTGAGT CGCGCTCGAA CATTTGGTTT TATGAAAGAC ATGGAAAAGC TTAGAGCGCA GAACCTAGGT TTGGGGGCCG GCTTGCATAA TGCGATTGGA CTCGATGAAA ATGGCGTTGT GAATCAGGAA GGGCTTAGGG ATAAAGATGA ATTTGTGCGT CATAAGATTC TGGATGCTGT TGGGGATTTA TATATGGCAG GTCATCCTAT TATTGGTGAG TTTACAGCAC ACAAATCAGG ACATGCTTTG AATAATCAGT TATTGAGAGC TTTAGTGGCC GACCCTGAGG CGTATGAAGT CGTAACGTAT GATGATGAAG AGCCCCCCAT TCAGTATGGA AGCAGTAAAA TTCTTGTGTA A
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Protein sequence | MKQRTLANPI KAKGVGLHTG HKSIMTLRPA PVNTGIVFRR IDQTPIVEFP VSPELVKETM LCTTIVQEQD NQKIKIATIE HLMSALAGVG IDNLYIDITA DEVPIMDGSA SHFIFLLQSA GIQLQEASKK FIRIKKQVKV QNEKGGVAEF SPYEGFRLNF SIEFDHPAFD QTAEKMTLSF SSTAYFKEVS RARTFGFMKD MEKLRAQNLG LGAGLHNAIG LDENGVVNQE GLRDKDEFVR HKILDAVGDL YMAGHPIIGE FTAHKSGHAL NNQLLRALVA DPEAYEVVTY DDEEPPIQYG SSKILV
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