| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0564 |
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| Symbol | |
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| ID | 3762385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 635049 |
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| End bp | 636473 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637785277 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_390834 |
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| Protein GI | 78484909 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATGGA ATTTAGCCGA TCTTGTTGAG GCCGTAAACG GAGTATTGGC GGGTGAGTTA
TTGGGCGATG AGCCGGTGGT TTTTACATCG GTCAGTACGG ATACGCGCAC GTTAAAATCC
GGTGCATTGT ATATCGCAAT TAAAGGCGAG CACTTTGATG GTCATGCCTT TATCGGAGAA
GCGGTTCGGC AGGGTGCCGT TGCGGTTTTA ATATCCGAAC CGATGGAAAC GGTTGTGCCT
GCGGTTTTAG TGGACGATAC CCGCATTGCT TTTGGTCAAT TTGCCGCTTG GCATCGTCAA
CAAATGTCGT TAAAAGGATT GGTTGGGGTG ACGGGTTCTA ATGGCAAAAC GACTACAAAA
GCACTACTTG CACACATATT ATCCAAGCAG GCTCAGGTTC TCTCAACGCA AGGGAACTTA
AACAATGATT ATGGCTTGCC TCGCACCTTA CTGGAGCTGT CAACATCGGA TGATTATGCG
GTAATTGAAA TGGGCGCTAA TCATGTCAAA GAGATTGCGT ACCTCACCCA AATTGCCAAG
CCGGATGTTG CGGTCATTAC ATTGGCAGCG GGCGCGCATC TGGAAGGGTT TGGTTCTCTG
GAAGGCGTGA TTGAAACTAA AGGTGAAATT CTGGACGGTG TTTGTGAAGG CGGCAAAGCC
GTTTTAAACA CCGATTCCCC TGGGTTTGAA TATTGGATCG AAAAAAGTCA ACAGCTAGGG
CTGTCAGTAA TCACGTTTGG ACAGGCTCGT TTTGCCAATG TACAAGTAAC CGATTTTACA
CAGGCTGAAA ACCAAATTAC ATTTACACTT GATTTGAATT GGCAGAACAT ACGCCAAGCG
GAAGTGGTGA CGATGCCTGT GCTTGGATTT CATAATGCAA TGAATGCCGC CGCTGCGACG
GCTGCGTGTT TAGCGTTAGG GTTGTCATGG TCGGAGATTT ACCCAGGCCT GGGCGATTTT
GATGGTGTTG CAGGACGATT ACAACAATCG AAATTACCCC AAGGGCTTTT GATTGATGAC
AGCTATAACG CGAATCCTTC TTCTGTCAAA GCGGCGATTG ATGCGCTGGT CCAGTTACCG
GGACCATCAG CCGTTTGTTT AGGAGGCATG GCGGAACTTG GCGCAGAATC AGAGGCATTG
CATCAGGACG TTGCCGCTTT TGCGAAAGCG AAAGGGGTGA CGCACTTATT GCTGTTCGGT
GAGGCAACAC AATGCATGCC AACCGTCTTT GGAGAAGGGG CTAAGTGGTT TGAGTCTCAC
GAGGCCTTGG CTCAGGAAGC CGTCGATTTA ATCCAACAGG ATAAAATACA AAACGTATTA
GTGAAAGGCT CCCGTTCGGC CAAAATGGAA CAGGTCAGCC AAAAAGTGTT AGCCAGATTG
GAAGCGAACT CTTCTTCCAG CAATCACCAC AATAACCGAG GATAA
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| Protein sequence | MTWNLADLVE AVNGVLAGEL LGDEPVVFTS VSTDTRTLKS GALYIAIKGE HFDGHAFIGE
AVRQGAVAVL ISEPMETVVP AVLVDDTRIA FGQFAAWHRQ QMSLKGLVGV TGSNGKTTTK
ALLAHILSKQ AQVLSTQGNL NNDYGLPRTL LELSTSDDYA VIEMGANHVK EIAYLTQIAK
PDVAVITLAA GAHLEGFGSL EGVIETKGEI LDGVCEGGKA VLNTDSPGFE YWIEKSQQLG
LSVITFGQAR FANVQVTDFT QAENQITFTL DLNWQNIRQA EVVTMPVLGF HNAMNAAAAT
AACLALGLSW SEIYPGLGDF DGVAGRLQQS KLPQGLLIDD SYNANPSSVK AAIDALVQLP
GPSAVCLGGM AELGAESEAL HQDVAAFAKA KGVTHLLLFG EATQCMPTVF GEGAKWFESH
EALAQEAVDL IQQDKIQNVL VKGSRSAKME QVSQKVLARL EANSSSSNHH NNRG
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