Gene Tcr_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0562 
Symbol 
ID3762383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp631788 
End bp633521 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content43% 
IMG OID637785275 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_390832 
Protein GI78484907 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.445743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCTTCG CGTTGATCGT GATGTTATTC ATCGCCATTT TTGCCAAAGC ATTTCATGTC 
CAAATCATAG AGTCCGATTT TCTTCAAAAT GAAGGGAACA AACGTCAAAT AAGAAGTTTG
GAAATTCCAG CTCCACGAGG AGAAATCTTT GATCGAAATG GTAATGTCCT AGCATTAAGC
ACCCCGATTG ATTCCATTTG GGTGGATCCT AAAATCCTAT CGTTCTATTT AGATCCTCAA
CAACAAAAGC AGAAAACAAA CCTGGATAAT CTGAGCGTAA GCGACTACAG CAAGAGACAA
GCACTTATTG AAGAGAAAAA ACAAGCTTAT CAAGCGATGC TGTCGTTGCT CGGTGTTTCG
TCCTCAAGTT TTACTCCTCA AGTTTTAGCT AAAAAGGATC GTCGTTTTTT ATATGTTAAA
CGAGGCGTGT TGCCTGGTTT GACCGCCAAG ATTGAGGCAT TAGATGTGCC TGGGCTTTAC
GTTCAAAACC AATATAAGCG CTATTACCCT GCGGGTGAAG TGGTTGGGCA TTTAATTGGT
TATACCAATA TTGATGATGT TGGGATAGCT GGCATCGAAA AGACATATGA AGACTGGTTG
TCGGGAATCG CAGGAAAAAA AGAAGTTATC AAAGATCGCG CAGGCCGAGT GGTGGAGTTT
GTAAAAGACA TTCATCCGGC TGAGCCTGGT AAACCGATCA CTTTGAGCAT TGATAAAGAC
ATACAGTTTT TTCTTTATCA TGCGCTGAAA AAAAGTTTTA TTAAACATCA AGCCAGTTCG
ATTATGTCGG TTATTTTAAA TGCCAAAACT GGCGAAGTGT TGGCCATGGT CTCTTTGCCT
GCGTTTAATC CGAATGATCG AAGCCAGTTA AGAGGGGCGC GTTTAAGAAA CCGTGTTATT
GCCGATCGGA TAGAGCCAGG GTCAACCGTC AAACCTTTTA TTATGGCTAA GGCATTGGAT
TTAAACGTGA TTCATTTGAG CGATAAGATT CATACTTCTC CCGGATCCAT CCACATTCAA
GGGCAACGCA TTACGGATAC TCGAAATCAT GGCACATTGA CGCCGGCGGA AGTGATTAAG
TTTTCCAGTA ATGTCGGAGC CACCAAAATT GCTTTGAAGA TGACGCCGAA TGATGAATGG
CAAATGTATC ATGATGTCGG GTTTGGACAA GACTTAGGTT TGTTCTTACC TGGCGAAACG
CTGGGGTTTT TACGCCCAGC GAACGAATGG CAAACCATTG ACCAGGCTTC GGCTTCGTTT
GGTTATGGAT TTAATATTAA TTTGATGCAA TTGGCGCATG CGTATATGAT TTTTGCCAAC
CAAGGACGCA TCAAACCGCT AAGCTTATTA AAGTTAAATA AGGCACCAGA AGGCCATCAA
GTGGTGTCAA AAGAAGCGGC AGAAGCTGTG CTTAGCATGA TGGAAAAGGT TGTTGGGCGT
AATGGAACTG CACCAGAAGC TAAAATTGAA GGTTATCGTA TTGCCGGGAA AACCGGAACC
GTCCATCGAA CCAAGATTGG GGGCTATGAA CAGAATAAAT ACATTGCCTT GTTTGCTGGA
ATGGTGCCTG TTTCAAACCC AAAATACATT ATGGTAACCG CTGTGAATGA ACCGAGCCGA
GGGATCTATT ATGGCGGTAA AGTGGCGGCA CCCATCTTTA AAGAAGTGAT GGAAGAAGTC
TTGCGTTTAA AAAACGTTGC GCCCGATGAA ATGATTGAGG ATGACAGTAA ATGA
 
Protein sequence
MIFALIVMLF IAIFAKAFHV QIIESDFLQN EGNKRQIRSL EIPAPRGEIF DRNGNVLALS 
TPIDSIWVDP KILSFYLDPQ QQKQKTNLDN LSVSDYSKRQ ALIEEKKQAY QAMLSLLGVS
SSSFTPQVLA KKDRRFLYVK RGVLPGLTAK IEALDVPGLY VQNQYKRYYP AGEVVGHLIG
YTNIDDVGIA GIEKTYEDWL SGIAGKKEVI KDRAGRVVEF VKDIHPAEPG KPITLSIDKD
IQFFLYHALK KSFIKHQASS IMSVILNAKT GEVLAMVSLP AFNPNDRSQL RGARLRNRVI
ADRIEPGSTV KPFIMAKALD LNVIHLSDKI HTSPGSIHIQ GQRITDTRNH GTLTPAEVIK
FSSNVGATKI ALKMTPNDEW QMYHDVGFGQ DLGLFLPGET LGFLRPANEW QTIDQASASF
GYGFNINLMQ LAHAYMIFAN QGRIKPLSLL KLNKAPEGHQ VVSKEAAEAV LSMMEKVVGR
NGTAPEAKIE GYRIAGKTGT VHRTKIGGYE QNKYIALFAG MVPVSNPKYI MVTAVNEPSR
GIYYGGKVAA PIFKEVMEEV LRLKNVAPDE MIEDDSK