Gene Tcr_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0539 
Symbol 
ID3761586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp604957 
End bp605775 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content42% 
IMG OID637785251 
Productphosphate ABC transporter permease 
Protein accessionYP_390809 
Protein GI78484884 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC AAAATATGAG TATTGCGATT GATCGTCACC ACCGTGGAAT GACTTTAGAC 
AGTGAACAAA CGGCCATTGT TGTGAAGAAC TGGAATTTAT ATTATGGGTC AAAGCAAGCT
TTACACAATA TTACGATGAA GCTGCCACAA AACCGTGTAA CCGCTTTTAT CGGTCCTTCA
GGTTGTGGTA AATCGACCTT GTTACGCTGT TTTAATCGAA TGAATGATTT GATTGATATT
GTGAGTGTTG AAGGTGAGAT GCTGCTGCAT GGTGAAAACA TGTACGCGAA AGAAATGGAT
GTGGCGGCTT TAAGACGTCG TGTTGGTATG GTGTTTCAAA AACCGAATCC ATTCCCGAAG
TCTATTTATG AAAACGTTTG TTATGGTTTG CGCTTACAAG GCATTAATGA TAAAAATGTG
TTAGACGAAA CCGTAGAGTG GGCCTTGAAA GGTGCAGGGC TTTGGGAAGA AGCCAAAGAC
CGTTTAGATG AAAATGCGTT AGGACTTTCT GGTGGGCAGC AACAGCGTTT GTGTATTGCC
CGTGCTATAG CCATCAAGCC GGAAGTGTTG TTATTGGATG AACCGACTTC GGCACTGGAT
CCTATTTCGA CGTTGGCCAT TGAAGAACTC ATTTTTGAGT TAAAGAAAGA TTTTACAATT
TTAATTGTGA CGCATAATAT GCAACAAGCA GCAAGGGTTT CGGACTATAC GGCATTTATG
TATATGGGAG ACTTAATAGA GTATACCGAC ACGGATTCAC TCTTTACGAA CCCTCAAGTT
AAACGCACAG AAGATTATAT CTCTGGTCGT TACGGCTAG
 
Protein sequence
MSEQNMSIAI DRHHRGMTLD SEQTAIVVKN WNLYYGSKQA LHNITMKLPQ NRVTAFIGPS 
GCGKSTLLRC FNRMNDLIDI VSVEGEMLLH GENMYAKEMD VAALRRRVGM VFQKPNPFPK
SIYENVCYGL RLQGINDKNV LDETVEWALK GAGLWEEAKD RLDENALGLS GGQQQRLCIA
RAIAIKPEVL LLDEPTSALD PISTLAIEEL IFELKKDFTI LIVTHNMQQA ARVSDYTAFM
YMGDLIEYTD TDSLFTNPQV KRTEDYISGR YG