Gene Tcr_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0533 
Symbol 
ID3761503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp596282 
End bp597466 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content45% 
IMG OID637785245 
Productacetylornithine and succinylornithine aminotransferase 
Protein accessionYP_390803 
Protein GI78484878 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAC AAGATCACTT AATGAATACT TACGCAAGAC TTCCGGTCAC ATTTGAATCC 
GGCCAAGGCG CTTTGCTATA TGACACAGAT GGGCAAGGAT ACCTGGATGC CATTAGCGGC
ATTGCTGTTT GCAGCTTGGG TCATGCTCAC CCCGAAATCT CCAGAACCAT CTGCGAACAA
AGCCAACAAC TGATTCATAC GTCCAATTTA TATGGAATTG AAAAACAAAC GCAACTCGCC
GATGAGCTGA TTGACATTTC ACATCTTGAA AAAGTATTTT TCTGTAATTC TGGCGCGGAA
GCCAATGAAA CGGCGATCAA AATGGCGCGA AAATTTGCTC ATCAGCAACA GATTCAATCG
CCAAAAATCA TCGTGATGGA AAACAGTTTT CATGGTCGGA CGTTAGCCAC ACTCTCCGCA
ACAGGCAACC CTAAAGTACA ACAAGGATTC GAGCCGCTTG TAGAAGGTTT CGTTCGCGTT
CCATACAATG ATGTAGAAGC CATACAAAAT GTCTCTTCGG ATTCTGACAT TGTCGCCATT
CTTGTTGAAC CTGTTCAGGG AGAAGGAGGC GTTAATATTC CGGATCGTGG CTATTTAAAA
GCATTACGTG AGATCTGCGA TCAAAACAAC TGGCTGCTCA TACTGGATGA AATCCAAACC
GGGATTGGAC GGACTGGAAA ATGGTTTGCT CACCAGCATG AAGATATTTT GCCGGATGTG
ATGACCTTAG CCAAAGCACT TGGCAATGGC GTTCCGATTG GCGCCTGTCT GGCCGGAAAA
AAAGCCGCCG ATTTGTTAGT TCCTGGTAAT CATGGCACCA CCTTTGGCGG TAATCCGCTT
GCCTGTGCAA CGGGGCTTGC GGTCATCAAA ACCCTTACTT TCCACAACTT TATTGAACAT
GTTGATGCAA AAGGCGCCCT ACTCGTCGCG CGTTTGCAAG AAGCATTAGA ACAGAATTCA
GCCGTTGTCA ACGTACGTGG CTTAGGCTAC ATGATCGGTA TTGAACTTGA TCGTCCTTGT
GCTGAACTGG TTCAAAAGGC TTTAAAAAAG CACCTTTTGA TTAATGTAAC GCAAGGCAAC
ACCATTCGCT TACTGCCGAC GTTTGTCATG TCAAATGACC AAACGGATCA GCTGATCAAT
ACCCTTGTGG AACTAATTGA AGAATTTACC CAAACAAGTA CATAA
 
Protein sequence
MNSQDHLMNT YARLPVTFES GQGALLYDTD GQGYLDAISG IAVCSLGHAH PEISRTICEQ 
SQQLIHTSNL YGIEKQTQLA DELIDISHLE KVFFCNSGAE ANETAIKMAR KFAHQQQIQS
PKIIVMENSF HGRTLATLSA TGNPKVQQGF EPLVEGFVRV PYNDVEAIQN VSSDSDIVAI
LVEPVQGEGG VNIPDRGYLK ALREICDQNN WLLILDEIQT GIGRTGKWFA HQHEDILPDV
MTLAKALGNG VPIGACLAGK KAADLLVPGN HGTTFGGNPL ACATGLAVIK TLTFHNFIEH
VDAKGALLVA RLQEALEQNS AVVNVRGLGY MIGIELDRPC AELVQKALKK HLLINVTQGN
TIRLLPTFVM SNDQTDQLIN TLVELIEEFT QTST