Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0532 |
Symbol | |
ID | 3761502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 595341 |
End bp | 596249 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785244 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_390802 |
Protein GI | 78484877 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0521808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTA AACACTTTTT AACCCTACAA GATTTCTCAC CCGCTGAGCT GAAACAGCTT ATGCTGCGTG CGATAGAACT TAAAAAGATT CAAAAGTCAG GCGAGATCTT TGAACCGCTA AAAAACAAAA CCCTTGCGAT GATTTTTGAA AAATCTTCAA CGCGAACACG CATTTCATTT GAAATTGGAA TGAGCCAGCT AGGCGGGCAC GCCCTATTCC TATCTCCTCG CGATACACAG CTAGGACGAG GCGAGCCGAT TGAAGACACG GCAAAAGTCA TTTCCAGCAT GGCGGATGGC ATCATGATCC GTACATTTGG CCATGAAGTT GTCGAAAAAA TGGCTGAGCA TTCACAAGTG CCGGTGATTA ACGCCTTAAC AGATGACTAC CACCCTTGCC AACTGCTGGC TGACATGCAA ACGTATTACG AGCATCGTGG TTCCATTGAA GGCAAAACCG TTTTATGGGT TGGTGATGGC AATAACATGT GCCACTCATA CATCAATGCT GCAAAACAAT ACGGTTTTAA ATTACGCATT TCAGCGCCTG AAGATTATGA TCCAAACCCG AGAATTGTTG AGGCAAACCA AGAATACGTT GAAATGATTC GTAACCCAAT GGATGCGGCT GAAAACGTTG ACCTTATCGT AACCGATGTT TGGGCCAGCA TGGGACAAGA AGAAGAGCAG AAAAAACGTG AAAAAGCTTT CAAAGACTAT CAAGTCAACA CAGCAATGAT GCAGCAAGCC AACCCGGACG CTTTATTCAT GCATTGTTTA CCGGCACACC GCGGTGAAGA AGTGTCTGCT GAAGTCATGG ATGCTGAAGA CAGTGTGGTT TGGGATGAAG CGGAAAATCG TCTTCATGCT CAAAAAGCTT TACTTGAATA TTTGATGGCC AAGGCTTAA
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Protein sequence | MSIKHFLTLQ DFSPAELKQL MLRAIELKKI QKSGEIFEPL KNKTLAMIFE KSSTRTRISF EIGMSQLGGH ALFLSPRDTQ LGRGEPIEDT AKVISSMADG IMIRTFGHEV VEKMAEHSQV PVINALTDDY HPCQLLADMQ TYYEHRGSIE GKTVLWVGDG NNMCHSYINA AKQYGFKLRI SAPEDYDPNP RIVEANQEYV EMIRNPMDAA ENVDLIVTDV WASMGQEEEQ KKREKAFKDY QVNTAMMQQA NPDALFMHCL PAHRGEEVSA EVMDAEDSVV WDEAENRLHA QKALLEYLMA KA
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