Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0519 |
Symbol | |
ID | 3761487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 581954 |
End bp | 583210 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785230 |
Product | diaminobutyrate--2-oxoglutarate aminotransferase |
Protein accession | YP_390789 |
Protein GI | 78484864 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases [TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTAG AAACATTTAA TAAATATGAA TCCGAAGTTC GTGGTTATAT CCGATCTTTT CCAGTAATTT TTGAAAGAGC CAAAATGGCT GAAATCTGGG ATGAAACGGG CAAACGTTAC ATCGACTTTT TTGCGGGGGC GGGTGCCTTA AACTACGGAC ACAACAACCC AGACATTAAT GCCGCATTAA TCGATTACCT TCAGCACGAT GGAATTGGTC ATGCGTTGGA TATGGGAACG GTTGCAAAGA AAGACTTTAT TGAAAGCTTT GTTTTTAACA TTCTTAAACC AAGAGATCTG GAATATAAAC TTCAGTTTGT TGGGCCAACA GGGACGAACG CAATTGAAAC CGCATTGAAA ATTGCACGTA AAGTGAAAGG GCGTAAGCAA GTTATGTCGT TTACTAACGG CTTCCACGGG ATGTCAATGG GGTCATTGAG TATCACAGGG AACAGTTATT ACCATGATGA AAGTTATGGT GTTCCGGGAT ACACCACTCA GGTGCCTTTC CATAAATACT TAGGGGACAA AGTCGATACC ATCGCTTATC TTCGTAAGAT TTTGGAAGAT GCTTCAAGTG GGACGGAATT ACCGGCTGCA ATCGTACTGG AAACCATCCA GGCAGAAGGT GGGATTAACG TTTCAGGTGA ACAGTGGCTA AGAGACTTAC GTCAGATCTG TGATGATTTC GATATCTTGA TGATTGCGGA TGAAATTCAG GTCGGTAACG GTCGTTCTTC AGACTTCTTT AGTTTTGAAA GAGCGGGCAT TAAACCGGAC ATCGTCACCT TGTCAAAATC GATTGGTGCA GGTCAACCGA TGGCAATGGT ACTATTGAAG CCTGAGTTAG ACCAATGGAG CCCAGGTGAA CACTCAGGTA CTTTCCGTGG AAATAACTTG GCATTCGTTT CTTCAAGCGT AGCCTTGAAA AAATATTGGG CAGATGACAG CTTCTCAAAA GAAGTGAAGC AAAAGTCTAA ACTGGTTCAA GAAAGAATGG AAAAAATGGC GTTGCGTTTC CCACAATATG TGCGCGAAAT TCGTGGTCAC GGTATGATCT GGGGGGCGGA ATTTAAAGAC CCAGAAATGA CTTCTAAAGT GTGTACTCAA GCCTTTGAAG ATGGTCTGGT AATCGAAACG GCCGGTGCCG GTGATGAAGT GATTAAATTC TTAGGACCAT TAATCATTAC AGAAGACTTG ATTAATGAAG GGTTTGATAT TTTAGAAGGT GCCGTTGAGA AAGTCGGTAA AAAATAA
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Protein sequence | MTLETFNKYE SEVRGYIRSF PVIFERAKMA EIWDETGKRY IDFFAGAGAL NYGHNNPDIN AALIDYLQHD GIGHALDMGT VAKKDFIESF VFNILKPRDL EYKLQFVGPT GTNAIETALK IARKVKGRKQ VMSFTNGFHG MSMGSLSITG NSYYHDESYG VPGYTTQVPF HKYLGDKVDT IAYLRKILED ASSGTELPAA IVLETIQAEG GINVSGEQWL RDLRQICDDF DILMIADEIQ VGNGRSSDFF SFERAGIKPD IVTLSKSIGA GQPMAMVLLK PELDQWSPGE HSGTFRGNNL AFVSSSVALK KYWADDSFSK EVKQKSKLVQ ERMEKMALRF PQYVREIRGH GMIWGAEFKD PEMTSKVCTQ AFEDGLVIET AGAGDEVIKF LGPLIITEDL INEGFDILEG AVEKVGKK
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