Gene Tcr_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0515 
Symbol 
ID3761994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp579521 
End bp579985 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID637785226 
ProductGreA/GreB family elongation factor 
Protein accessionYP_390785 
Protein GI78484860 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000042647 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACA TTACACAAGA GGGGTTTTAC CGCTTAACGG AAGAATTGAG TTTTTTATGG 
AAAACCAAAC GGCCAGAAAT TGTCCGAGCG ATTTCAACGG CTGCGGCTGA AGGTGATCGT
TCTGAGAATG CGGAATACAT TTACCGTAAA AAAGAATTGC GTGAAACGGA TCGAAAAATT
CGCTACCTGG AACGGCATTT AAAAGACATA AACGTGGTGC GAGATAAACC GCGTCAGCGA
GACAAGGTGT TTTTTGGTGC TTATGTGTTG CTGGAAGACG AAGACGGTCA ACAAAAGCAA
TACCGTATTG TCGGTGGGAT TGAAGCGCGG GGTGAAGAAA ATGAAATTTC AGTTAAATCG
CCTGTCGCAC AAGCGTTAAT TGGTAAGTTG TTGGATCAAG ACGTTGAGGT TTTGCTTCCG
GATAATCGCA AAATTCATTA CACCATTTTA GACATTAAGT ATTAG
 
Protein sequence
MNYITQEGFY RLTEELSFLW KTKRPEIVRA ISTAAAEGDR SENAEYIYRK KELRETDRKI 
RYLERHLKDI NVVRDKPRQR DKVFFGAYVL LEDEDGQQKQ YRIVGGIEAR GEENEISVKS
PVAQALIGKL LDQDVEVLLP DNRKIHYTIL DIKY