Gene Tcr_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0503 
Symbol 
ID3761982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp563468 
End bp564403 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content45% 
IMG OID637785214 
ProductKpsF/GutQ family protein 
Protein accessionYP_390773 
Protein GI78484848 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTT TAACGATTGC CAAACGCGTT TTCGACATTG AAGCAGAAGC CGTTTACCAC 
CTCAAAACAT TGCTTGATGA AAATTTTTCT CAAAGTGTTG ATGCCATTTT AGCCACCGAA
GGTCGCGTCG TTATTTGTGG GATGGGAAAA TCCGGTCTCA TTGGCAAAAA AATTATGGCC
ACACTGGCCA GCACAGGCAC ACCTTGTTTT TTTATGCACC CTGGCGAAGC ATTCCATGGT
GATTTGGGGA TGGTTTCACC CAAAGATGTC TTTATTGCGC TCTCTAATTC AGGGGAAACG
GAAGAAGTCA TCAAACTAAT CCCTTTTTTA AAGGACAATG GCAACACGAT TATTTCCATG
ACTGGTCGAC CTGACTCCAC CTTAGCAAAA AATTCAAATT TCCATTTGAA TATCGCCGTG
CCACAAGAAG CTTGCCCGCA CCAACTGGCT CCTACCTCCT CCACTACAGC CACGCTTGTC
ATGGGCGATG CTCTGGCAGT GGCGTTAATG GAAAAGCGTG ATTTTCAACC ACAGGATTTT
GCTCGTTTCC ATCCCGGCGG CAGCTTAGGC CGTAAGCTTC TAACGCGTGT AAAACATGAA
ATGAAATCGG AAAACCTGCC TTTTGTTGAA AAATCCGCCT CCATGAAAGA CGTCATTCAC
ACCATGACGG ATGGCCGTCT GGGGCTGTGC ATTGTCAACC AAGGAGAAGG CATCATTACC
GATGGCGACT TACGTCGTCA GATGGAAGAA GATCCTGCAA ACTTTATGCA AAAAACCGCT
GGTGACATCA TGGGAACACA CCCTAAAATG ATCGATTCAG AAGCACGGCT ATCCGATGCG
GAAGAAATGA TGACGCAGAA AAAAATCACC TCTTTACTTG TGTCTGATCA GAACCAGGTT
GTGGGCGTCA TTCAAATTTA CGATTTAAAT AATTAA
 
Protein sequence
MDTLTIAKRV FDIEAEAVYH LKTLLDENFS QSVDAILATE GRVVICGMGK SGLIGKKIMA 
TLASTGTPCF FMHPGEAFHG DLGMVSPKDV FIALSNSGET EEVIKLIPFL KDNGNTIISM
TGRPDSTLAK NSNFHLNIAV PQEACPHQLA PTSSTTATLV MGDALAVALM EKRDFQPQDF
ARFHPGGSLG RKLLTRVKHE MKSENLPFVE KSASMKDVIH TMTDGRLGLC IVNQGEGIIT
DGDLRRQMEE DPANFMQKTA GDIMGTHPKM IDSEARLSDA EEMMTQKKIT SLLVSDQNQV
VGVIQIYDLN N